Orthogroup:group_814


Homologs in group_814

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04080 FBDBKF_04080 Morganella morganii S1 lysS lysine--tRNA ligase
EHELCC_05370 EHELCC_05370 Morganella morganii S2 lysS lysine--tRNA ligase
NLDBIP_05690 NLDBIP_05690 Morganella morganii S4 lysS lysine--tRNA ligase
LHKJJB_02570 LHKJJB_02570 Morganella morganii S3 lysS lysine--tRNA ligase
HKOGLL_06045 HKOGLL_06045 Morganella morganii S5 lysS lysine--tRNA ligase
F4V73_RS08520 F4V73_RS08520 Morganella psychrotolerans lysS lysine--tRNA ligase
PMI_RS09900 PMI_RS09900 Proteus mirabilis HI4320 lysS lysine--tRNA ligase

Distribution of group_814 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_814 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_814

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_814.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lysS 7

Product

# Product Occurence
1 lysine--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1190 7 J Translation, ribosomal structure and biogenesis (J) Lysyl-tRNA synthetase (class II)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04567 7 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00152 7 tRNA synthetases class II (D, K and N)
PF01336 7 OB-fold nucleic acid binding domain

Annotations of the 515 SwissProt hits

Annotation Number of occurrences
Aspartate--tRNA(Asp/Asn) ligase 1
Elongation factor P--(R)-beta-lysine ligase 51
Lysine--tRNA ligase 417
Lysine--tRNA ligase 1 4
Lysine--tRNA ligase 2 3
Lysine--tRNA ligase cla4 1
Lysine--tRNA ligase, chloroplastic/mitochondrial 1
Lysine--tRNA ligase, cytoplasmic 3
Lysine--tRNA ligase, heat inducible 3
Lysine--tRNA ligase, mitochondrial 2
Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX 26
Probable lysine--tRNA ligase, cytoplasmic 3

Protein length

Min length 504
Max length 505
Mean length (sd) 504.9 (0.4)
Median length 505.0

Protein length distribution