Orthogroup:group_793


Homologs in group_793

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03180 FBDBKF_03180 Morganella morganii S1 degS outer membrane-stress sensor serine endopeptidase DegS
EHELCC_07355 EHELCC_07355 Morganella morganii S2 degS outer membrane-stress sensor serine endopeptidase DegS
NLDBIP_07680 NLDBIP_07680 Morganella morganii S4 degS outer membrane-stress sensor serine endopeptidase DegS
LHKJJB_07215 LHKJJB_07215 Morganella morganii S3 degS outer membrane-stress sensor serine endopeptidase DegS
HKOGLL_03715 HKOGLL_03715 Morganella morganii S5 degS outer membrane-stress sensor serine endopeptidase DegS
F4V73_RS11740 F4V73_RS11740 Morganella psychrotolerans degS outer membrane-stress sensor serine endopeptidase DegS
PMI_RS18235 PMI_RS18235 Proteus mirabilis HI4320 degS outer membrane-stress sensor serine endopeptidase DegS

Distribution of group_793 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_793 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_793

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_793.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 degS 7

Product

# Product Occurence
1 outer membrane-stress sensor serine endopeptidase DegS 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0265 7 O Posttranslational modification, protein turnover, chaperones (O) Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04691 1 serine protease DegS [EC:3.4.21.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13180 7 PDZ domain
PF13365 7 Trypsin-like peptidase domain

Annotations of the 123 SwissProt hits

Annotation Number of occurrences
Anti-sigma-I factor RsgI9 1
Magnetosome formation protease MamE 2
PDZ domain-containing protein C23G3.12c 1
Periplasmic pH-dependent serine endoprotease DegQ 1
Periplasmic serine endoprotease DegP 3
Peroxisomal leader peptide-processing protease 2
Pro-apoptotic serine protease NMA111 10
Pro-apoptotic serine protease nma111 4
Probable membrane transporter protein MamO 2
Probable periplasmic serine endoprotease DegP-like 23
Probable periplasmic serine protease do/HhoA-like 1
Probable serine protease HtrA1 1
Probable serine protease do-like 1
Protease Do-like 1, chloroplastic 1
Protease Do-like 10, mitochondrial 1
Protease Do-like 2, chloroplastic 1
Protease Do-like 4, mitochondrial 1
Protease Do-like 5, chloroplastic 1
Protease Do-like 8, chloroplastic 1
Protease Do-like 9 1
Putative protease Do-like 11, mitochondrial 1
Putative protease Do-like 13 1
Putative protease Do-like 14 1
Putative protease Do-like 3, mitochondrial 1
Putative serine protease HhoA 1
Putative serine protease HhoB 1
Putative serine protease HtrA 1
Serine endoprotease DegS 4
Serine protease DegP homolog 1
Serine protease Do-like HtrA 4
Serine protease Do-like HtrB 1
Serine protease HTR4 2
Serine protease HTRA1 6
Serine protease HTRA1A 1
Serine protease HTRA1B 1
Serine protease HTRA2, mitochondrial 15
Serine protease HTRA3 3
Serine protease HTRA4 2
Serine protease HtrA-like 13
Serine protease PepD 1
Uncharacterized protein y4bJ 1
Uncharacterized serine protease YyxA 1
Uncharacterized serine protease syc0938_d 1

Protein length

Min length 352
Max length 361
Mean length (sd) 353.9 (3.5)
Median length 352.0

Protein length distribution