Orthogroup:group_793



Homologs in group_793

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03720 FBDBKF_03720 Morganella morganii S1 - hydrogenase 4 subunit F
EHELCC_06815 EHELCC_06815 Morganella morganii S2 - hydrogenase 4 subunit F
NLDBIP_07140 NLDBIP_07140 Morganella morganii S4 - hydrogenase 4 subunit F
LHKJJB_06675 LHKJJB_06675 Morganella morganii S3 - hydrogenase 4 subunit F
HKOGLL_04255 HKOGLL_04255 Morganella morganii S5 - hydrogenase 4 subunit F
F4V73_RS11150 F4V73_RS11150 Morganella psychrotolerans - hydrogenase 4 subunit F
PMI_RS12475 PMI_RS12475 Proteus mirabilis HI4320 - hydrogenase 4 subunit F

Distribution of group_793 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_793 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_793

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_793.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 hydrogenase 4 subunit F 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0651 7 CP Energy production and conversion (C)
Inorganic ion transport and metabolism (P)
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12141 7 hydrogenase-4 component F [EC:1.-.-.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00361 7 Proton-conducting membrane transporter
PF00662 7 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus

Annotations of the 561 SwissProt hits

Annotation Number of occurrences
F(420)H(2) dehydrogenase subunit L 1
F(420)H(2) dehydrogenase subunit M 1
F(420)H(2) dehydrogenase subunit N 1
Formate hydrogenlyase subunit 3 1
Hydrogenase-4 component B 1
Hydrogenase-4 component D 1
Hydrogenase-4 component F 1
Hydrogenase-4 component F homolog 1
NAD(P)H-quinone oxidoreductase chain 4 20
NAD(P)H-quinone oxidoreductase chain 4 1 10
NAD(P)H-quinone oxidoreductase chain 4 2 9
NAD(P)H-quinone oxidoreductase chain 4 3 2
NAD(P)H-quinone oxidoreductase chain 4, chloroplastic 13
NAD(P)H-quinone oxidoreductase chain 4-1 1
NAD(P)H-quinone oxidoreductase chain 4-2 2
NAD(P)H-quinone oxidoreductase chain 4-3 1
NAD(P)H-quinone oxidoreductase chain 5 2
NAD(P)H-quinone oxidoreductase subunit 2 11
NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic 1
NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic 1
NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic 7
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic 113
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (Fragment) 7
NAD(P)H-quinone oxidoreductase subunit 5, organellar chromatophore 1 1
NAD(P)H-quinone oxidoreductase subunit 5, organellar chromatophore 2 1
NADH-quinone oxidoreductase chain 12 1
NADH-quinone oxidoreductase chain 13 1
NADH-quinone oxidoreductase subunit 12 1
NADH-quinone oxidoreductase subunit L 16
NADH-quinone oxidoreductase subunit M 12
NADH-quinone oxidoreductase subunit N 93
NADH-quinone oxidoreductase subunit N 1 9
NADH-quinone oxidoreductase subunit N 2 10
NADH-quinone oxidoreductase subunit N 3 1
NADH-ubiquinone oxidoreductase chain 2 3
NADH-ubiquinone oxidoreductase chain 4 34
NADH-ubiquinone oxidoreductase chain 5 88
Na(+)/H(+) antiporter subunit A 2
Na(+)/H(+) antiporter subunit A1 19
Na(+)/H(+) antiporter subunit D 2
Na(+)/H(+) antiporter subunit D1 17
Probable K(+)/H(+) antiporter subunit A/B 1
Putative antiporter subunit mnhA2 19
Putative antiporter subunit mnhD2 19
Uncharacterized protein MJ1309 1
Uncharacterized protein MT0090 1
Uncharacterized protein Rv0083 1

Protein length

Min length 522
Max length 526
Mean length (sd) 525.4 (1.5)
Median length 526.0

Protein length distribution