Orthogroup:group_718


Homologs in group_718

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03130 FBDBKF_03130 Morganella morganii S1 rplM 50S ribosomal protein L13
EHELCC_07405 EHELCC_07405 Morganella morganii S2 rplM 50S ribosomal protein L13
NLDBIP_07730 NLDBIP_07730 Morganella morganii S4 rplM 50S ribosomal protein L13
LHKJJB_07265 LHKJJB_07265 Morganella morganii S3 rplM 50S ribosomal protein L13
HKOGLL_03665 HKOGLL_03665 Morganella morganii S5 rplM 50S ribosomal protein L13
F4V73_RS11790 F4V73_RS11790 Morganella psychrotolerans rplM 50S ribosomal protein L13
PMI_RS18255 PMI_RS18255 Proteus mirabilis HI4320 rplM 50S ribosomal protein L13

Distribution of group_718 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_718 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_718

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_718.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rplM 7

Product

# Product Occurence
1 50S ribosomal protein L13 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0102 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L13

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02871 7 large subunit ribosomal protein L13 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00572 7 Ribosomal protein L13

Annotations of the 510 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein uL13 508
Large ribosomal subunit protein uL13c 2

Protein length

Unique protein length 142

Protein length distribution