Orthogroup:group_692


Homologs in group_692

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02930 FBDBKF_02930 Morganella morganii S1 prpB methylisocitrate lyase
EHELCC_03400 EHELCC_03400 Morganella morganii S2 prpB methylisocitrate lyase
NLDBIP_00060 NLDBIP_00060 Morganella morganii S4 prpB methylisocitrate lyase
LHKJJB_01975 LHKJJB_01975 Morganella morganii S3 prpB methylisocitrate lyase
HKOGLL_02015 HKOGLL_02015 Morganella morganii S5 prpB methylisocitrate lyase
F4V73_RS05375 F4V73_RS05375 Morganella psychrotolerans prpB methylisocitrate lyase
PMI_RS13620 PMI_RS13620 Proteus mirabilis HI4320 aceA isocitrate lyase

Distribution of group_692 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_692 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_692

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_692.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 prpB 6
2 aceA 1

Product

# Product Occurence
1 methylisocitrate lyase 6
2 isocitrate lyase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2224 1 C Energy production and conversion (C) Isocitrate lyase
COG2513 6 G Carbohydrate transport and metabolism (G) 2-Methylisocitrate lyase and related enzymes, PEP mutase family

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00463 1 Isocitrate lyase family
PF13714 6 Phosphoenolpyruvate phosphomutase

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG001381 1 Isocitrate lyase Icl (isocitrase) (isocitratase) VF0253 Others

Annotations of the 113 SwissProt hits

Annotation Number of occurrences
2,3-dimethylmalate lyase 1
2-methylisocitrate lyase 8
2-methylisocitrate lyase, mitochondrial 2
Bifunctional glyoxylate cycle protein 1
Carboxyvinyl-carboxyphosphonate phosphorylmutase 1
Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic 1
Fosfomycin biosynthesis bifunctional protein Fom1 1
Isocitrate lyase 43
Isocitrate lyase (Fragment) 1
Isocitrate lyase 1 3
Isocitrate lyase 1 (Fragment) 1
Isocitrate lyase 2 3
Isocitrate lyase 2 (Fragment) 1
Methylisocitrate lyase, mitochondrial 1
Mitochondrial 2-methylisocitrate lyase 1
Mitochondrial 2-methylisocitrate lyase ICL2 1
Oxaloacetate decarboxylase 28
Oxaloacetate decarboxylase 1 2
Oxaloacetate decarboxylase 2 2
Petal death protein 1
Phosphoenolpyruvate phosphomutase 5
Phosphonopyruvate hydrolase 1
Probable 2-methylisocitrate lyase 1 1
Probable 2-methylisocitrate lyase 2 1
Putative isocitrate lyase subunit A 1
Putative isocitrate lyase subunit B 1

Protein length

Min length 294
Max length 435
Mean length (sd) 314.1 (53.3)
Median length 294.0

Protein length distribution