Homologs in group_619

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01970 FBDBKF_01970 100.0 Morganella morganii S1 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
EHELCC_02440 EHELCC_02440 100.0 Morganella morganii S2 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
NLDBIP_01020 NLDBIP_01020 100.0 Morganella morganii S4 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
LHKJJB_01015 LHKJJB_01015 100.0 Morganella morganii S3 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
F4V73_RS04315 F4V73_RS04315 81.7 Morganella psychrotolerans - molecular chaperone
PMI_RS05320 PMI_RS05320 61.5 Proteus mirabilis HI4320 - molecular chaperone

Distribution of the homologs in the orthogroup group_619

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_619

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75915 1.05e-70 215 57 2 184 1 ycdY Chaperone protein YcdY Escherichia coli (strain K12)
P44248 2.74e-29 109 41 5 182 3 HI_1543 Uncharacterized protein HI_1543 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P69855 1.88e-16 77 31 6 190 3 dmsD Tat proofreading chaperone DmsD Shigella flexneri
P69853 1.88e-16 77 31 6 190 1 dmsD Tat proofreading chaperone DmsD Escherichia coli (strain K12)
P69854 1.88e-16 77 31 6 190 3 dmsD Tat proofreading chaperone DmsD Escherichia coli O157:H7
Q8CW16 2.18e-15 73 30 5 189 3 dmsD Tat proofreading chaperone DmsD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8ZPK0 2.49e-09 57 31 5 190 1 dmsD Tat proofreading chaperone DmsD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PHH8 2.8e-09 57 30 5 190 3 dmsD Tat proofreading chaperone DmsD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z6Y5 6.46e-09 56 30 5 190 3 dmsD Tat proofreading chaperone DmsD Salmonella typhi
P44102 4.65e-05 45 24 5 185 3 dmsD Probable Tat proofreading chaperone DmsD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01055
Feature type CDS
Gene torD
Product Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
Location 186845 - 187405 (strand: 1)
Length 561 (nucleotides) / 186 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_619
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02613 Nitrate reductase delta subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3381 Posttranslational modification, protein turnover, chaperones (O) O Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation

Protein Sequence

MNEFSLVCRLLGTLFNRAPADPVLAPVLTMIKQGQLKAHWPLEQDALLTRLAEHCDSAELAADYQQLFADGAVAQRRSDYTGEPESEVRQFLSERGMPLTDAVTDSFGSLLLAASWLEDQAQEDEVSAQTALFADYLLPWSDAFLGKVESHAQHGFYRTLAILTREALSALYEELTENAEEDENDD

Flanking regions ( +/- flanking 50bp)

TAAGGACAATCCGGACAATAGCGGCAACTCAGTTAATAAGGATTTGAAGTATGAATGAATTTTCACTGGTCTGCCGCCTGCTCGGAACCCTGTTTAACCGCGCTCCGGCTGATCCCGTACTGGCACCGGTTCTGACGATGATTAAGCAGGGGCAGCTGAAAGCCCACTGGCCGCTGGAGCAGGATGCACTGCTGACACGGCTGGCTGAGCATTGTGACAGTGCGGAACTGGCAGCGGATTATCAGCAGTTGTTTGCTGACGGGGCGGTGGCTCAGCGCCGGTCGGACTATACCGGTGAGCCGGAAAGTGAAGTTCGTCAGTTTCTCAGTGAGCGCGGGATGCCGCTGACTGATGCGGTAACCGACAGTTTCGGGTCTCTGCTGCTGGCGGCATCCTGGCTGGAAGATCAGGCACAGGAAGATGAAGTCAGTGCGCAGACGGCGCTGTTTGCGGACTATCTGCTGCCGTGGAGTGATGCATTTCTCGGGAAAGTCGAATCTCATGCACAGCACGGCTTTTACCGTACGCTGGCTATCCTGACCCGTGAAGCACTGTCCGCTTTGTATGAAGAGCTGACAGAAAACGCAGAAGAAGACGAAAACGATGATTAGTATGTGACGTTGTCACATATTATTTTTCAGGCCCGGTCAGATGACCGGGC