Orthogroup:group_682


Homologs in group_682

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02605 FBDBKF_02605 Morganella morganii S1 acrB Multidrug efflux pump subunit AcrB
EHELCC_03075 EHELCC_03075 Morganella morganii S2 acrB Multidrug efflux pump subunit AcrB
NLDBIP_00385 NLDBIP_00385 Morganella morganii S4 acrB Multidrug efflux pump subunit AcrB
LHKJJB_01650 LHKJJB_01650 Morganella morganii S3 acrB Multidrug efflux pump subunit AcrB
HKOGLL_01690 HKOGLL_01690 Morganella morganii S5 acrB Multidrug efflux pump subunit AcrB
F4V73_RS05045 F4V73_RS05045 Morganella psychrotolerans - efflux RND transporter permease subunit
F4V73_RS11990 F4V73_RS11990 Morganella psychrotolerans - MMPL family transporter

Distribution of group_682 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_682 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_682

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_682.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrB 5
2 - 2

Product

# Product Occurence
1 Multidrug efflux pump subunit AcrB 5
2 efflux RND transporter permease subunit 1
3 MMPL family transporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0841 6 V Defense mechanisms (V) Multidrug efflux pump subunit AcrB
COG4258 1 R General function prediction only (R) Predicted exporter

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00873 6 AcrB/AcrD/AcrF family
PF03176 1 MMPL family

Annotations of the 155 SwissProt hits

Annotation Number of occurrences
Antibiotic efflux pump membrane transporter ArpB 1
Cation efflux system protein CusA 3
Cation efflux system protein CzcA 1
Cobalt-zinc-cadmium resistance protein CzcA 1
Efflux pump membrane transporter BepE 1
Efflux pump membrane transporter BepG 1
Hopanoid transporter HpnN 1
Multidrug efflux pump subunit AcrB 1
Multidrug export protein AcrF 1
Multidrug resistance protein MdtB 55
Multidrug resistance protein MdtC 66
Multidrug resistance protein MdtF 3
Multidrug resistance protein MexB 1
Multidrug/solvent efflux pump membrane transporter MepB 1
Nickel and cobalt resistance protein CnrA 1
Nickel-cobalt-cadmium resistance protein NccA 1
Nodulation protein NolG 1
Probable aminoglycoside efflux pump 1
Probable efflux pump membrane transporter SepB 1
Probable efflux pump membrane transporter TtgB 1
Protein HelA 1
Protein translocase subunit SecD 3
Putative cation efflux system protein SilA 1
Solvent-resistant pump membrane transporter SrpB 1
Swarming motility protein SwrC 1
Toluene efflux pump membrane transporter TtgB 1
Toluene efflux pump membrane transporter TtgE 1
Toluene efflux pump membrane transporter TtgH 1
Uncharacterized 17.3 kDa protein in cblS 5'region 1
Uncharacterized transporter HI_0895 1

Protein length

Min length 737
Max length 1028
Mean length (sd) 986.4 (110.0)
Median length 1028.0

Protein length distribution