Homologs in group_646

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01500 FBDBKF_01500 92.0 Morganella morganii S1 recN DNA repair protein RecN
EHELCC_00045 EHELCC_00045 92.0 Morganella morganii S2 recN DNA repair protein RecN
NLDBIP_03415 NLDBIP_03415 92.0 Morganella morganii S4 recN DNA repair protein RecN
LHKJJB_04930 LHKJJB_04930 92.0 Morganella morganii S3 recN DNA repair protein RecN
HKOGLL_02115 HKOGLL_02115 92.0 Morganella morganii S5 recN DNA repair protein RecN
PMI_RS09385 PMI_RS09385 72.3 Proteus mirabilis HI4320 recN DNA repair protein RecN

Distribution of the homologs in the orthogroup group_646

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_646

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P05824 0.0 761 68 0 553 1 recN DNA repair protein RecN Escherichia coli (strain K12)
P0C6Q4 0.0 535 49 0 553 3 recN DNA repair protein RecN Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F379 0.0 535 49 0 553 3 recN DNA repair protein RecN Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P44496 7.34e-163 478 46 1 554 3 recN DNA repair protein RecN Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q87BS5 8.01e-117 360 39 5 555 3 recN DNA repair protein RecN Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PB02 7.58e-116 357 39 5 555 3 recN DNA repair protein RecN Xylella fastidiosa (strain 9a5c)
Q9K974 1.91e-89 289 35 10 563 3 recN DNA repair protein RecN Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P17894 3.69e-83 273 30 4 568 3 recN DNA repair protein RecN Bacillus subtilis (strain 168)
Q9S220 8.44e-80 264 31 7 569 3 recN DNA repair protein RecN Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q92J40 3.37e-78 259 32 6 553 3 recN DNA repair protein RecN Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UKJ1 1.1e-73 247 31 7 554 3 recN DNA repair protein RecN Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q68XI5 3.26e-71 241 30 4 551 3 recN DNA repair protein RecN Rickettsia typhi (strain ATCC VR-144 / Wilmington)
O83456 2.46e-70 239 30 9 575 3 recN DNA repair protein RecN Treponema pallidum (strain Nichols)
Q1RHI2 1.2e-69 236 31 9 555 3 recN DNA repair protein RecN Rickettsia bellii (strain RML369-C)
Q9ZDY2 3.1e-68 233 30 7 554 3 recN DNA repair protein RecN Rickettsia prowazekii (strain Madrid E)
Q9WXF2 1.68e-62 218 30 7 552 1 recN DNA repair protein RecN Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P74374 4.43e-59 209 31 16 585 3 recN DNA repair protein RecN Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q49896 8.42e-57 203 28 11 596 3 recN DNA repair protein RecN Mycobacterium leprae (strain TN)
P9WHI6 1.73e-55 199 28 11 589 3 recN DNA repair protein RecN Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WHI7 1.85e-55 199 28 11 589 1 recN DNA repair protein RecN Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P0A5U7 1.85e-55 199 28 11 589 3 recN DNA repair protein RecN Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O66834 9.73e-38 149 26 10 554 3 recN DNA repair protein RecN Aquifex aeolicus (strain VF5)
Q9ZJ80 1.46e-18 92 23 19 562 3 recN DNA repair protein RecN Helicobacter pylori (strain J99 / ATCC 700824)
O25943 4.53e-18 90 23 20 569 3 recN DNA repair protein RecN Helicobacter pylori (strain ATCC 700392 / 26695)
Q9PHM5 1.89e-16 85 27 10 274 3 recN DNA repair protein RecN Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P75361 3.68e-07 57 32 2 112 3 smc Chromosome partition protein Smc Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47540 5.18e-07 56 32 2 112 3 smc Chromosome partition protein Smc Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
O42649 4.82e-05 50 23 3 132 1 psm3 Structural maintenance of chromosomes protein 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
B2FDA8 0.000144 48 21 6 222 1 smc-3 Structural maintenance of chromosomes protein 3 Caenorhabditis elegans
P47037 0.000149 48 32 4 108 1 SMC3 Structural maintenance of chromosomes protein 3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q81ZL2 0.000316 47 30 4 106 3 smc Chromosome partition protein Smc Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Q00737 0.000374 47 29 3 98 2 sudA Chromosome segregation protein sudA Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q56YN8 0.000512 47 31 3 88 2 SMC3 Structural maintenance of chromosomes protein 3 Arabidopsis thaliana
Q8REH4 0.000804 46 26 5 143 3 smc Chromosome partition protein Smc Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01905
Feature type CDS
Gene recN
Product DNA repair protein RecN
Location 416940 - 418601 (strand: -1)
Length 1662 (nucleotides) / 553 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_646
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02463 RecF/RecN/SMC N terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0497 Replication, recombination and repair (L) L DNA repair ATPase RecN

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03631 DNA repair protein RecN (Recombination protein N) - -

Protein Sequence

MLTQLTISQFAIVRELEIDFRAGMSAITGETGAGKSIAIDALGLCLGNRADANMVRPGANRADICARFSLKDTPAARLWLEEHQLDDNHECLLRRTINSDGRSRGFINGTAVPLSQLRELGTLLIQIHGQHAHQHLLESSHQKVLLDTYANQGLLLGEMKKAWQLWHDACRVLAGYQQQSLEREARQQLVDYHLRELSEFEPLEGEFPEIDAEYKRQANSGQFLSLSQETLNILSENDERNILSMLNHARNELSELISLDESLSPLLTMLEEAAIQVDEVTNEVRHYRDQVDLDPNRLYELEQRLSRYISLSRKHHTPPEELYVLYMQLQEEQQMQQESEHHSEELSQQVEQCYQQALTIAQQLHMVREHYAAELGELITQSMHHLSMPHGRFTVDISFTPDQLNMDGASKIEFNVTTNPGQPHQALVKVASGGELSRIALAIQVITAKKMDTPALIFDEVDVGISGPTATIVGKLLRELGESTQVMCVTHLPQVAGCGHQHYFVSKHTNGTETETAMQLLDKKSRVQELARLLAGTEVTKNTLASAKELLAA

Flanking regions ( +/- flanking 50bp)

ATTATACTGTACATAAATACAGATATGGTTATATCAACAGGAGAGGCGGAATGTTAACTCAGCTCACTATCAGCCAATTTGCCATTGTCCGCGAATTAGAAATCGACTTCCGCGCAGGAATGTCAGCCATTACCGGCGAAACCGGTGCCGGTAAATCCATCGCCATTGATGCCCTGGGGCTGTGCCTCGGCAACCGTGCTGATGCCAATATGGTGCGCCCCGGTGCAAACCGCGCAGATATCTGCGCCCGCTTCTCCCTGAAAGATACCCCCGCCGCCCGTCTCTGGCTGGAAGAACACCAGCTTGATGATAACCACGAGTGTCTGCTGCGCCGGACAATCAACAGTGACGGACGTTCCCGCGGGTTTATTAATGGCACCGCAGTTCCCCTTTCCCAGTTACGGGAACTGGGTACTTTGCTTATTCAAATTCACGGTCAGCATGCTCACCAGCATCTCCTTGAGAGCAGCCACCAGAAAGTGTTACTGGACACATACGCAAACCAGGGGCTGCTGTTAGGTGAAATGAAAAAAGCCTGGCAACTGTGGCATGATGCCTGCCGGGTACTGGCGGGTTATCAGCAGCAGTCGCTGGAGCGGGAAGCCCGTCAGCAGCTTGTTGATTATCATCTGAGAGAACTCAGTGAATTTGAACCACTCGAAGGAGAATTTCCTGAGATTGATGCGGAATATAAACGACAGGCAAATTCAGGTCAGTTTCTGAGCCTGAGTCAGGAAACATTAAATATTCTCAGTGAAAATGATGAACGCAATATTCTCAGTATGCTCAACCATGCCAGAAATGAACTCAGCGAACTGATTTCACTGGATGAAAGCCTGTCACCTTTACTGACCATGCTGGAAGAAGCCGCAATTCAGGTTGATGAAGTCACTAACGAAGTGCGCCATTACCGTGACCAGGTCGATCTTGACCCCAACCGCCTTTACGAACTGGAGCAACGCCTTTCACGTTATATCAGCCTTAGCCGTAAACATCACACGCCGCCGGAAGAGCTTTATGTGCTCTATATGCAGTTACAGGAAGAGCAACAGATGCAGCAGGAAAGTGAGCATCACAGTGAAGAACTGAGTCAGCAGGTAGAGCAGTGCTATCAGCAGGCACTGACTATCGCACAGCAACTGCATATGGTCAGAGAGCACTACGCCGCTGAACTGGGCGAACTGATCACACAAAGTATGCACCACCTGTCGATGCCTCACGGGCGCTTTACTGTTGATATCAGCTTTACGCCAGATCAGCTTAATATGGATGGTGCCAGCAAAATTGAATTTAACGTCACCACCAACCCGGGCCAGCCACATCAGGCATTGGTTAAAGTCGCTTCTGGCGGGGAATTATCCCGTATTGCTCTGGCAATCCAGGTGATCACTGCGAAGAAAATGGATACCCCTGCACTGATTTTTGATGAAGTCGATGTCGGGATCAGCGGCCCGACTGCAACTATCGTAGGAAAACTGCTTCGTGAACTGGGTGAGTCCACACAAGTAATGTGTGTGACACATTTACCACAGGTCGCCGGTTGCGGGCATCAGCACTATTTTGTCAGCAAACACACCAACGGCACAGAAACAGAAACCGCAATGCAGTTACTTGACAAAAAATCACGGGTACAGGAACTTGCCCGGTTGCTGGCAGGTACCGAAGTCACAAAAAATACACTGGCGAGTGCAAAAGAATTACTGGCGGCGTAACAATCTGACAGATTTCATTCAACTTTTATGCGATCCTATGGTCATAGAAA