Orthogroup:group_644


Homologs in group_644

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02115 FBDBKF_02115 Morganella morganii S1 mdtJ multidrug/spermidine efflux SMR transporter subunit MdtJ
EHELCC_02585 EHELCC_02585 Morganella morganii S2 mdtJ multidrug/spermidine efflux SMR transporter subunit MdtJ
NLDBIP_00875 NLDBIP_00875 Morganella morganii S4 mdtJ multidrug/spermidine efflux SMR transporter subunit MdtJ
LHKJJB_01160 LHKJJB_01160 Morganella morganii S3 mdtJ multidrug/spermidine efflux SMR transporter subunit MdtJ
HKOGLL_01200 HKOGLL_01200 Morganella morganii S5 mdtJ multidrug/spermidine efflux SMR transporter subunit MdtJ
F4V73_RS04480 F4V73_RS04480 Morganella psychrotolerans mdtJ multidrug/spermidine efflux SMR transporter subunit MdtJ
PMI_RS05590 PMI_RS05590 Proteus mirabilis HI4320 mdtJ multidrug/spermidine efflux SMR transporter subunit MdtJ

Distribution of group_644 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_644 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_644

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_644.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mdtJ 7

Product

# Product Occurence
1 multidrug/spermidine efflux SMR transporter subunit MdtJ 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2076 7 V Defense mechanisms (V) Multidrug transporter EmrE and related cation transporters

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11743 7 spermidine export protein MdtJ - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00893 7 Small Multidrug Resistance protein

Annotations of the 154 SwissProt hits

Annotation Number of occurrences
Guanidinium exporter 16
Multidrug resistance protein EbrA 3
Multidrug resistance protein EbrB 3
Multidrug resistance protein mmr 2
Multidrug transporter EmrE 1
Multidrug transporter PA4990 1
Nicotine metabolites export pump subunit NepA 1
Nicotine metabolites export pump subunit NepB 1
Putative ethidium bromide resistance protein 3
Quaternary ammonium compound-resistance protein QacC 2
Quaternary ammonium compound-resistance protein QacE 2
Quaternary ammonium compound-resistance protein QacF 1
Quaternary ammonium compound-resistance protein QacG 1
Quaternary ammonium compound-resistance protein QacH 1
Spermidine export protein MdtI 57
Spermidine export protein MdtJ 57
Uncharacterized membrane protein YvaE 1
Uncharacterized membrane protein YvdR 1

Protein length

Min length 129
Max length 146
Mean length (sd) 131.6 (6.4)
Median length 129.0

Protein length distribution