Orthogroup:group_631


Homologs in group_631

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02040 FBDBKF_02040 Morganella morganii S1 aspS aspartate--tRNA ligase
EHELCC_02510 EHELCC_02510 Morganella morganii S2 aspS aspartate--tRNA ligase
NLDBIP_00950 NLDBIP_00950 Morganella morganii S4 aspS aspartate--tRNA ligase
LHKJJB_01085 LHKJJB_01085 Morganella morganii S3 aspS aspartate--tRNA ligase
HKOGLL_01125 HKOGLL_01125 Morganella morganii S5 aspS aspartate--tRNA ligase
F4V73_RS04405 F4V73_RS04405 Morganella psychrotolerans aspS aspartate--tRNA ligase
PMI_RS05390 PMI_RS05390 Proteus mirabilis HI4320 aspS aspartate--tRNA ligase

Distribution of group_631 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_631 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_631

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_631.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 aspS 7

Product

# Product Occurence
1 aspartate--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0173 7 J Translation, ribosomal structure and biogenesis (J) Aspartyl-tRNA synthetase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01876 7 aspartyl-tRNA synthetase [EC:6.1.1.12] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00152 7 tRNA synthetases class II (D, K and N)
PF01336 7 OB-fold nucleic acid binding domain
PF02938 7 GAD domain

Annotations of the 518 SwissProt hits

Annotation Number of occurrences
Aspartate--tRNA ligase 248
Aspartate--tRNA ligase 2 1
Aspartate--tRNA ligase, chloroplastic/mitochondrial 1
Aspartate--tRNA(Asp/Asn) ligase 267
Aspartate--tRNA(Asp/Asn) ligase 2 1

Protein length

Min length 589
Max length 594
Mean length (sd) 589.7 (1.9)
Median length 589.0

Protein length distribution