Orthogroup:group_563


Homologs in group_563

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01450 FBDBKF_01450 Morganella morganii S1 rseB sigma-E factor regulatory protein RseB
EHELCC_00095 EHELCC_00095 Morganella morganii S2 rseB sigma-E factor regulatory protein RseB
NLDBIP_03365 NLDBIP_03365 Morganella morganii S4 rseB sigma-E factor regulatory protein RseB
LHKJJB_04880 LHKJJB_04880 Morganella morganii S3 rseB sigma-E factor regulatory protein RseB
HKOGLL_02165 HKOGLL_02165 Morganella morganii S5 rseB sigma-E factor regulatory protein RseB
F4V73_RS01955 F4V73_RS01955 Morganella psychrotolerans rseB sigma-E factor regulatory protein RseB
PMI_RS09340 PMI_RS09340 Proteus mirabilis HI4320 rseB sigma-E factor regulatory protein RseB

Distribution of group_563 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_563 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_563

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_563.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rseB 7

Product

# Product Occurence
1 sigma-E factor regulatory protein RseB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3026 7 T Signal transduction mechanisms (T) RseB, negative regulator of sigma E activity

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03598 7 sigma-E factor negative regulatory protein RseB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03888 7 MucB/RseB N-terminal domain
PF17188 7 MucB/RseB C-terminal domain

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Sigma factor AlgU regulatory protein MucB 1
Sigma-E factor regulatory protein RseB 5

Protein length

Min length 317
Max length 323
Mean length (sd) 318.0 (2.2)
Median length 317.0

Protein length distribution