Orthogroup:group_558


Homologs in group_558

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01410 FBDBKF_01410 Morganella morganii S1 era GTPase Era
EHELCC_00135 EHELCC_00135 Morganella morganii S2 era GTPase Era
NLDBIP_03325 NLDBIP_03325 Morganella morganii S4 era GTPase Era
LHKJJB_04840 LHKJJB_04840 Morganella morganii S3 era GTPase Era
HKOGLL_02205 HKOGLL_02205 Morganella morganii S5 era GTPase Era
F4V73_RS01985 F4V73_RS01985 Morganella psychrotolerans era GTPase Era
PMI_RS09315 PMI_RS09315 Proteus mirabilis HI4320 era GTPase Era

Distribution of group_558 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_558 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_558

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_558.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 era 7

Product

# Product Occurence
1 GTPase Era 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1159 7 J Translation, ribosomal structure and biogenesis (J) GTPase Era, involved in 16S rRNA processing

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03595 7 GTPase - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01926 7 50S ribosome-binding GTPase
PF07650 7 KH domain

Annotations of the 546 SwissProt hits

Annotation Number of occurrences
GTP-binding protein ERG 2
GTPase Der 189
GTPase ERA-like, chloroplastic 2
GTPase ERA1, chloroplastic 1
GTPase Era 344
GTPase Era (Fragment) 1
GTPase Era, mitochondrial 7

Protein length

Unique protein length 302

Protein length distribution