COG1352


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1352, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Methylase of chemotaxis methyl-accepting proteins
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG1352 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_482 FBDBKF_00775 140447 141310 -1 cheR Methylase of chemotaxis methyl-accepting proteins Morganella morganii S1
1 group_482 EHELCC_00770 167558 168421 1 cheR Methylase of chemotaxis methyl-accepting proteins Morganella morganii S2
2 group_482 NLDBIP_02690 511715 512578 -1 cheR Methylase of chemotaxis methyl-accepting proteins Morganella morganii S4
3 group_482 LHKJJB_04205 118956 119819 -1 cheR Methylase of chemotaxis methyl-accepting proteins Morganella morganii S3
4 group_482 HKOGLL_02840 167763 168626 1 cheR Methylase of chemotaxis methyl-accepting proteins Morganella morganii S5
5 group_482 F4V73_RS06775 1405393 1406256 -1 CheR family methyltransferase Morganella psychrotolerans
6 group_482 PMI_RS08125 1774704 1775594 -1 cheR protein-glutamate O-methyltransferase CheR Proteus mirabilis HI4320