COG1749


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1749, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar hook protein FlgE
Function(s) descr. Cell motility (N)

Occurence in the database

COG1749 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_470 FBDBKF_00700 117437 118648 -1 flgE flagellar hook protein FlgE Morganella morganii S1
1 group_470 EHELCC_00845 190220 191431 1 flgE flagellar hook protein FlgE Morganella morganii S2
2 group_470 NLDBIP_02615 488705 489916 -1 flgE flagellar hook protein FlgE Morganella morganii S4
3 group_470 LHKJJB_04130 95946 97157 -1 flgE flagellar hook protein FlgE Morganella morganii S3
4 group_470 HKOGLL_02915 190425 191636 1 flgE flagellar hook protein FlgE Morganella morganii S5
5 group_470 F4V73_RS06710 1394259 1395473 -1 flgE flagellar hook protein FlgE Morganella psychrotolerans
6 group_470 PMI_RS08060 1761874 1763094 -1 flgE flagellar hook protein FlgE Proteus mirabilis HI4320