Orthogroup:group_496



Homologs in group_496

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00905 FBDBKF_00905 Morganella morganii S1 ttrR tetrathionate respiration response regulator TtrR
EHELCC_00640 EHELCC_00640 Morganella morganii S2 ttrR tetrathionate respiration response regulator TtrR
NLDBIP_02820 NLDBIP_02820 Morganella morganii S4 ttrR tetrathionate respiration response regulator TtrR
LHKJJB_04335 LHKJJB_04335 Morganella morganii S3 ttrR tetrathionate respiration response regulator TtrR
HKOGLL_02710 HKOGLL_02710 Morganella morganii S5 ttrR tetrathionate respiration response regulator TtrR
F4V73_RS06900 F4V73_RS06900 Morganella psychrotolerans ttrR tetrathionate respiration response regulator TtrR
PMI_RS08245 PMI_RS08245 Proteus mirabilis HI4320 ttrR tetrathionate respiration response regulator TtrR

Distribution of group_496 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_496 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_496

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_496.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ttrR 7

Product

# Product Occurence
1 tetrathionate respiration response regulator TtrR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4566 7 TK Signal transduction mechanisms (T)
Transcription (K)
DNA-binding response regulator, FixJ family, consists of REC and HTH domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13041 7 two-component system, LuxR family, response regulator TtrR Two-component system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 7 Response regulator receiver domain
PF00196 7 Bacterial regulatory proteins, luxR family

Annotations of the 390 SwissProt hits

Annotation Number of occurrences
3',5'-cyclic-nucleotide phosphodiesterase regA 1
Acid tolerance regulatory protein ActR 2
Adenylate cyclase 2 1
Aerobic respiration control protein ArcA 4
Aerobic respiration control protein ArcA homolog 1
Alginate biosynthesis transcriptional regulatory protein AlgB 3
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1
Alkaline phosphatase synthesis transcriptional regulatory protein SphR 1
C4-dicarboxylate transport transcriptional regulatory protein DctD 3
C4-dicarboxylate transport transcriptional regulatory protein DctR 1
Cell cycle response regulator CtrA 9
Cell cycle transcriptional regulator CtrA 2
Chemotaxis protein CheY 2
CsgBAC operon transcriptional regulatory protein 1
Cyclic di-GMP phosphodiesterase response regulator RpfG 1
DNA-binding dual master transcriptional regulator RpaA 2
DNA-binding dual transcriptional regulator OmpR 8
DNA-binding response regulator MtrA 5
DNA-binding transcriptional activator DevR/DosR 2
DNA-binding transcriptional activator EvgA 4
DNA-binding transcriptional regulator NtrC 8
Fimbriae Z protein 3
Hybrid signal transduction histidine kinase C 1
Hybrid signal transduction histidine kinase F 1
Hybrid signal transduction histidine kinase J 1
KDP operon transcriptional regulatory protein KdpE 1
Light-activated DNA-binding protein EL222 1
Luminescence regulatory protein LuxO 2
Nitrate/nitrite response regulator protein NarL 4
Nitrate/nitrite response regulator protein NarP 1
Nitrogen assimilation regulatory protein NtrX 1
Nodulation protein W 1
Oxygen regulatory protein NreC 18
Phosphate regulon transcriptional regulatory protein PhoB 8
Phosphoglycerate transport system transcriptional regulatory protein PgtA 1
Photosynthetic apparatus regulatory protein RegA 3
Positive alginate biosynthesis regulatory protein 1
Probable C4-dicarboxylate response regulator DctR 2
Probable transcriptional regulator ycf27 7
Probable transcriptional regulator ycf29 4
Probable transcriptional regulatory protein NarL 2
Probable transcriptional regulatory protein SYNPCC7002_A0851 1
Probable transcriptional regulatory protein SgaR 1
Probable transcriptional regulatory protein SilR 1
Probable transcriptional regulatory protein TcrX 1
Probable transcriptional regulatory protein y4xI 1
Protein PetR 1
Protein RcaC 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 3 1
Putative HTH-type transcriptional regulator MT0914 1
Putative HTH-type transcriptional regulator Mb0914c 1
Putative HTH-type transcriptional regulator Rv0890c 1
Putative response regulator NtrX-like 5
Putative transcriptional regulator 1
Regulatory protein AtoC 1
Regulatory protein LuxO 4
Response regulator ArlR 11
Response regulator GacA 4
Response regulator GtcR 1
Response regulator MprA 14
Response regulator PleD 2
Response regulator Rre1 1
Response regulator SaeR 10
Response regulator SsrB 1
Response regulator UvrY 4
Response regulator protein CarR 1
Response regulator protein FleR 1
Response regulator protein GraR 18
Response regulator protein PilR 1
Response regulator protein TmoT 1
Response regulator protein TodT 3
Response regulator protein VraR 6
Sensor histidine kinase GacS 1
Sensor protein GacS 1
Sensory transduction protein BceR 2
Sensory transduction protein RegX3 4
Signal transduction histidine-protein kinase BarA 4
Sporulation initiation phosphotransferase F 2
Swarming motility regulation protein RssB 1
Tetrathionate response regulatory protein TtrR 1
TorCAD operon transcriptional regulatory protein TorR 2
Transcription factor SKN7 2
Transcriptional activator protein CopR 1
Transcriptional activator protein CzcR 1
Transcriptional activator protein ExaE 1
Transcriptional activator protein IrlR 2
Transcriptional regulatory protein AfsQ1 1
Transcriptional regulatory protein AruR 1
Transcriptional regulatory protein BasR 2
Transcriptional regulatory protein ChvI 3
Transcriptional regulatory protein CiaR 2
Transcriptional regulatory protein ComA 1
Transcriptional regulatory protein CpxR 4
Transcriptional regulatory protein CpxR homolog 1
Transcriptional regulatory protein CrdR 1
Transcriptional regulatory protein CreB 1
Transcriptional regulatory protein CseB 2
Transcriptional regulatory protein CusR 3
Transcriptional regulatory protein CutR 2
Transcriptional regulatory protein DegU 2
Transcriptional regulatory protein DesR 1
Transcriptional regulatory protein DltR 2
Transcriptional regulatory protein DpiA 4
Transcriptional regulatory protein FixJ 3
Transcriptional regulatory protein FlgR 1
Transcriptional regulatory protein GlrR 1
Transcriptional regulatory protein GltR 1
Transcriptional regulatory protein HprR 1
Transcriptional regulatory protein LiaR 1
Transcriptional regulatory protein LnrK 1
Transcriptional regulatory protein LytR 9
Transcriptional regulatory protein MalR 1
Transcriptional regulatory protein MctR 1
Transcriptional regulatory protein NatR 1
Transcriptional regulatory protein PcoR 1
Transcriptional regulatory protein PmrA 1
Transcriptional regulatory protein QseB 5
Transcriptional regulatory protein QseF 1
Transcriptional regulatory protein RcsB 7
Transcriptional regulatory protein ResD 1
Transcriptional regulatory protein RprY 1
Transcriptional regulatory protein SrrA 8
Transcriptional regulatory protein TcrA 2
Transcriptional regulatory protein TctD 2
Transcriptional regulatory protein TdiR 1
Transcriptional regulatory protein TrcR 1
Transcriptional regulatory protein UhpA 5
Transcriptional regulatory protein WalR 23
Transcriptional regulatory protein YdfI 1
Transcriptional regulatory protein YxdJ 1
Transcriptional regulatory protein ZraR 5
Two-component response regulator ARR10 1
Two-component response regulator PprB 1
Uncharacterized 76.5 kDa protein in phbC 3'region 1
Uncharacterized response regulatory protein VC_A0850 1
Uncharacterized response regulatory protein VP0538 1
Uncharacterized response regulatory protein VPA0021 1
Uncharacterized response regulatory protein VV2_1193 1
Uncharacterized response regulatory protein YgeK 2
Uncharacterized transcriptional regulatory protein YbdJ 1
Uncharacterized transcriptional regulatory protein YcbL 1
Uncharacterized transcriptional regulatory protein YclJ 1
Uncharacterized transcriptional regulatory protein YesN 1
Uncharacterized transcriptional regulatory protein YhcZ 1
Uncharacterized transcriptional regulatory protein YkoG 1
Uncharacterized transcriptional regulatory protein YxjL 1
Virulence factors putative positive transcription regulator BvgA 3

Protein length

Min length 200
Max length 203
Mean length (sd) 202.6 (1.1)
Median length 203.0

Protein length distribution