Homologs in group_4854
1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Source | Gene | Product | |
|---|---|---|---|---|
| PMI_RS13300 | PMI_RS13300 | Proteus mirabilis HI4320 | sctF | type III secretion system needle filament subunit SctF |
Distribution of group_4854 homologs
Number of homologs in each genome (first column and blue bar chart)
This page summarizes the annotation of all members of the orthologous group group_4854.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.
Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used
to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.
| # | Gene name | Occurence |
|---|---|---|
| 1 | sctF | 1 |
| # | Product | Occurence |
|---|---|---|
| 1 | type III secretion system needle filament subunit SctF | 1 |
| KO | Occurences | Description | Pathways | Modules |
|---|---|---|---|---|
| K03221 | 1 | type III secretion protein F | Bacterial secretion system Pathogenic Escherichia coli infection Shigellosis Salmonella infection |
EHEC/EPEC pathogenicity signature, T3SS and effectors |
| Domain ID | Occurences | Description |
|---|---|---|
| PF09392 | 1 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF |
| Annotation | Number of occurrences |
|---|---|
| SPI-1 type 3 secretion system needle filament protein | 1 |
| Type 3 secretion system needle filament protein | 4 |
