COG1298


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1298, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Flagellar biosynthesis protein FlhA
Function(s) descr. Cell motility (N)

Occurence in the database

COG1298 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_477 FBDBKF_00745 134362 136458 -1 flhA flagellar biosynthesis protein FlhA Morganella morganii S1
1 group_477 EHELCC_00800 172410 174506 1 flhA flagellar biosynthesis protein FlhA Morganella morganii S2
2 group_477 NLDBIP_02660 505630 507726 -1 flhA flagellar biosynthesis protein FlhA Morganella morganii S4
3 group_477 LHKJJB_04175 112871 114967 -1 flhA flagellar biosynthesis protein FlhA Morganella morganii S3
4 group_477 HKOGLL_02870 172615 174711 1 flhA flagellar biosynthesis protein FlhA Morganella morganii S5
5 group_477 F4V73_RS06745 1399314 1401410 -1 flhA flagellar biosynthesis protein FlhA Morganella psychrotolerans
6 group_477 PMI_RS08100 1768884 1770974 -1 flhA flagellar biosynthesis protein FlhA Proteus mirabilis HI4320