Orthogroup:group_422


Homologs in group_422

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05275 FBDBKF_05275 Morganella morganii S1 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
EHELCC_12315 EHELCC_12315 Morganella morganii S2 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
NLDBIP_12655 NLDBIP_12655 Morganella morganii S4 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
LHKJJB_12515 LHKJJB_12515 Morganella morganii S3 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
HKOGLL_11130 HKOGLL_11130 Morganella morganii S5 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
F4V73_RS05730 F4V73_RS05730 Morganella psychrotolerans oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
PMI_RS07120 PMI_RS07120 Proteus mirabilis HI4320 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF

Distribution of group_422 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_422 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_422

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_422.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 oppF 7

Product

# Product Occurence
1 murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4608 7 E Amino acid transport and metabolism (E) ABC-type oligopeptide transport system, ATPase component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02032 7 peptide/nickel transport system ATP-binding protein Quorum sensing -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00005 7 ABC transporter
PF08352 7 Oligopeptide/dipeptide transporter, C-terminal region

Annotations of the 546 SwissProt hits

Annotation Number of occurrences
ABC transporter ATP-binding protein YtrE 1
Arginine transport ATP-binding protein ArgV 1
Arginine transport ATP-binding protein ArtM 1
Carnitine transport ATP-binding protein OpuCA 2
Choline transport ATP-binding protein OpuBA 1
Di/tripeptide transport ATP-binding protein DppD 1
Di/tripeptide transport ATP-binding protein DppF 1
Dipeptide transport ATP-binding protein DppD 7
Dipeptide transport ATP-binding protein DppF 3
Energy-coupling factor transporter ATP-binding protein EcfA2 2
Fe(3+) ions import ATP-binding protein FbpC 7
Fe(3+) ions import ATP-binding protein FbpC 1 3
Fe(3+) ions import ATP-binding protein FbpC 2 1
Glucose import ATP-binding protein GlcV 1
Glutamate transport ATP-binding protein GluA 2
Glutamine transport ATP-binding protein GlnQ 1
Glutathione import ATP-binding protein GsiA 16
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA 1
Glycine betaine/proline betaine transport system ATP-binding protein ProV 2
Lipoprotein-releasing system ATP-binding protein LolD 2
Metal-staphylopine import system ATP-binding protein CntD 2
Metal-staphylopine import system ATP-binding protein CntF 2
Methionine import ATP-binding protein MetN 139
Methionine import ATP-binding protein MetN 1 54
Methionine import ATP-binding protein MetN 2 54
Methionine import ATP-binding protein MetN 3 8
Methionine import ATP-binding protein MetN 4 1
Nickel import ATP-binding protein NikE 16
Nickel import system ATP-binding protein NikE 9
Nopaline permease ATP-binding protein P 1
Oligopeptide transport ATP-binding protein AmiE 2
Oligopeptide transport ATP-binding protein AmiF 1
Oligopeptide transport ATP-binding protein AppD 1
Oligopeptide transport ATP-binding protein AppF 1
Oligopeptide transport ATP-binding protein OppD 8
Oligopeptide transport ATP-binding protein OppF 14
Peptide transport system ATP-binding protein SapD 5
Peptide transport system ATP-binding protein SapF 4
Peptidoglycan transport ATP-binding protein YejF 1
Probable D,D-dipeptide transport ATP-binding protein DdpD 1
Probable D,D-dipeptide transport ATP-binding protein DdpF 1
Probable amino-acid ABC transporter ATP-binding protein HI_1078 1
Probable peptide ABC transporter ATP-binding protein y4tR 1
Probable peptide ABC transporter ATP-binding protein y4tS 1
Probable sulfate/thiosulfate import ATP-binding protein CysA 1
Putative oligopeptide transport ATP-binding protein YkfD 1
Putative peptide import ATP-binding protein BAB2_0817 1
Putative peptide import ATP-binding protein BAB2_0818 1
Putative peptide import ATP-binding protein BAB2_1052 1
Putative peptide import ATP-binding protein BAB2_1053 1
Putative peptide import ATP-binding protein BMEII0205 1
Putative peptide import ATP-binding protein BMEII0206 1
Putative peptide import ATP-binding protein BMEII0863 1
Putative peptide import ATP-binding protein BMEII0864 1
Putative peptide import ATP-binding protein BOV_A0347 1
Putative peptide import ATP-binding protein BOV_A0348 1
Putative peptide import ATP-binding protein BRA0404/BS1330_II0401 1
Putative peptide import ATP-binding protein BRA0405/BS1330_II0402 1
Putative peptide import ATP-binding protein BRA1094/BS1330_II1086 1
Putative peptide import ATP-binding protein BruAb2_0796 1
Putative peptide import ATP-binding protein BruAb2_0797 1
Putative peptide import ATP-binding protein BruAb2_1033 1
Putative peptide import ATP-binding protein BruAb2_1034 1
Putative phosphonates utilization ATP-binding protein PhnK 1
Putrescine export system ATP-binding protein SapD 1
Putrescine export system ATP-binding protein SapF 1
Putrescine transport ATP-binding protein PotG 1
Spermidine/putrescine import ATP-binding protein PotA 66
Spermidine/putrescine import ATP-binding protein PotA 2 1
Sulfate/thiosulfate import ATP-binding protein CysA 37
Sulfate/thiosulfate import ATP-binding protein CysA (Fragment) 1
Sulfate/thiosulfate import ATP-binding protein CysA 1 1
Sulfate/thiosulfate import ATP-binding protein CysA 2 4
Sulfate/thiosulfate import ATP-binding protein cysA 1
Sulfoquinovosyl glycerol transport ATP-binding protein SmoE 1
Trehalose import ATP-binding protein SugC 2
Trehalose/maltose import ATP-binding protein MalK 1
Trimethylamine N-oxide transport system ATP-binding protein TmoW 1
Uncharacterized ABC transporter ATP-binding protein MT1318 1
Uncharacterized ABC transporter ATP-binding protein Mb1312c 1
Uncharacterized ABC transporter ATP-binding protein Rv1281c 1
Uncharacterized ABC transporter ATP-binding protein YdcT 1
Uncharacterized ABC transporter ATP-binding protein YejF 1
sn-glycerol-3-phosphate import ATP-binding protein UgpC 15
sn-glycerol-3-phosphate import ATP-binding protein UgpC 1 1
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 1
sn-glycerol-3-phosphate import ATP-binding protein UgpC 3 1

Protein length

Min length 332
Max length 335
Mean length (sd) 332.4 (1.1)
Median length 332.0

Protein length distribution