Orthogroup:group_4126


Homologs in group_4126

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS05130 PMI_RS05130 Proteus mirabilis HI4320 - TRAP transporter permease

Distribution of group_4126 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_4126

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_4126.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1

Product

# Product Occurence
1 TRAP transporter permease 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4666 1 R General function prediction only (R) TRAP-type uncharacterized transport system, fused permease components

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06808 1 Tripartite ATP-independent periplasmic transporter, DctM component

Annotations of the 12 SwissProt hits

Annotation Number of occurrences
2,3-diketo-L-gulonate TRAP transporter large permease protein YiaN 1
C4-dicarboxylate TRAP transporter large permease protein DctM 3
Isethionate TRAP transporter permease protein DctMQ 1
Putative TRAP transporter large permease protein HI_0050 1
Putative TRAP transporter large permease protein HI_1029 1
Sialic acid TRAP transporter large permease protein SiaM 1
Sialic acid TRAP transporter permease protein SiaT 3
Uncharacterized protein y4mL 1