Orthogroup:group_3954


Homologs in group_3954

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS12165 PMI_RS12165 Proteus mirabilis HI4320 traC type IV secretion system protein TraC

Distribution of group_3954 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3954

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_3954.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 traC 1

Product

# Product Occurence
1 type IV secretion system protein TraC 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3451 1 U Intracellular trafficking, secretion, and vesicular transport (U) Type IV secretory pathway, VirB4 component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12063 1 conjugal transfer ATP-binding protein TraC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF11130 1 TraC protein
PF19044 1 TraG P-loop domain
PF19357 1 Family of unknown function (DUF5934)

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Conjugal transfer protein TrbE 1
Probable conjugal transfer protein TrbE part 2 1
Protein TraC 1