Orthogroup:group_3912


Homologs in group_3912

Help

2 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS17990 PMI_RS17990 Proteus mirabilis HI4320 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE
PMI_RS17995 PMI_RS17995 Proteus mirabilis HI4320 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA

Distribution of group_3912 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of the RefSeq best hits of group_3912

Orthogroup content: 2 members

Help

This page summarizes the annotation of all members of the orthologous group group_3912.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ugpE 1
2 ugpA 1

Product

# Product Occurence
1 sn-glycerol-3-phosphate ABC transporter permease UgpE 1
2 sn-glycerol-3-phosphate ABC transporter permease UgpA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0395 1 G Carbohydrate transport and metabolism (G) ABC-type glycerol-3-phosphate transport system, permease component
COG1175 1 G Carbohydrate transport and metabolism (G) ABC-type sugar transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05814 1 sn-glycerol 3-phosphate transport system permease protein ABC transporters -
K05815 1 sn-glycerol 3-phosphate transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 2 Binding-protein-dependent transport system inner membrane component

Annotations of the 143 SwissProt hits

Annotation Number of occurrences
Alpha-glucoside transport system permease protein AglF 1
Alpha-glucoside transport system permease protein AglG 1
Arabinooligosaccharides transport system permease protein AraP 2
Arabinooligosaccharides transport system permease protein AraQ 2
Diacetylchitobiose uptake system permease protein DasB 1
Diacetylchitobiose uptake system permease protein DasC 1
Diacetylchitobiose uptake system permease protein NgcF 1
Diacetylchitobiose uptake system permease protein NgcG 1
Galactooligosaccharides transport system permease protein GanP 1
Galactooligosaccharides transport system permease protein GanQ 1
Glucose import system permease protein GlcT 1
Glucose import system permease protein GlcU 1
Inner membrane ABC transporter permease protein YcjO 2
Inner membrane ABC transporter permease protein YcjP 1
Lactose transport system permease protein LacF 1
Lactose transport system permease protein LacG 1
Maltodextrin transport system permease protein MalC 2
Maltodextrin transport system permease protein MalD 2
Maltodextrin transport system permease protein MdxF 1
Maltodextrin transport system permease protein MdxG 1
Maltose/maltodextrin transport system permease protein MalF 13
Maltose/maltodextrin transport system permease protein MalG 13
Melibiose/raffinose/stachyose import permease protein MelC 1
Melibiose/raffinose/stachyose import permease protein MelD 1
Multiple sugar-binding transport system permease protein MsmF 1
Multiple sugar-binding transport system permease protein MsmG 1
Osmoprotective compounds uptake permease protein GgtC 1
Osmoprotective compounds uptake permease protein GgtD 1
Polygalacturonan/rhamnogalacturonan transport system permease protein YtcP 1
Polygalacturonan/rhamnogalacturonan transport system permease protein YteP 1
Probable ABC transporter permease protein BAB2_0490 1
Probable ABC transporter permease protein BRA0749/BS1330_II0742 1
Probable ABC transporter permease protein BruAb2_0483 1
Probable ABC transporter permease protein MG188 1
Probable ABC transporter permease protein MG188 homolog 1
Probable ABC transporter permease protein MG189 1
Probable ABC transporter permease protein MG189 homolog 1
Probable ABC transporter permease protein PH1036 1
Probable ABC transporter permease protein PH1038 1
Probable ABC transporter permease protein PH1215 1
Probable ABC transporter permease protein PH1216 1
Probable ABC transporter permease protein YesP 1
Probable ABC transporter permease protein YesQ 1
Probable ABC transporter permease protein YurM 1
Probable ABC transporter permease protein YurN 1
Probable ABC transporter permease protein y4oQ 1
Probable ABC transporter permease protein y4oR 1
Probable starch degradation products transport system permease protein AmyC 1
Probable starch degradation products transport system permease protein AmyD 1
Protein LplB 1
Protein LplC 1
Putative ABC transporter permease protein ORF1 (Fragment) 2
Putative ABC transporter permease protein ORF2 1
Sulfoquinovosyl glycerol transport system permease protein SmoG 1
Sulfoquinovosyl glycerol transport system permease protein SmoH 1
Trehalose transport system permease protein SugA 2
Trehalose transport system permease protein SugB 2
Trehalose/maltose transport system permease protein MalF 1
Trehalose/maltose transport system permease protein MalG 1
Xylose/arabinose import permease protein XacH 1
Xylose/arabinose import permease protein XacI 1
sn-glycerol-3-phosphate transport system permease protein UgpA 25
sn-glycerol-3-phosphate transport system permease protein UgpE 25

Protein length

Min length 282
Max length 294
Mean length (sd) 288.0 (8.5)
Median length 288.0

Protein length distribution