Homologs in group_3904
1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product | |
|---|---|---|---|---|---|
| PMI_RS10490 | PMI_RS10490 | 32.8 | Proteus mirabilis HI4320 | - | chondroitinase family polysaccharide lyase |
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| P59807 | 0.0 | 1919 | 89 | 0 | 1020 | 1 | None | Chondroitin sulfate ABC endolyase | Proteus vulgaris |
| C7S340 | 8.05e-89 | 310 | 27 | 32 | 970 | 1 | ChABCII | Chondroitin sulfate ABC exolyase (Fragment) | Proteus vulgaris |
| Q8A2I1 | 5.42e-78 | 279 | 25 | 37 | 1087 | 1 | chonabc | Chondroitin sulfate ABC exolyase | Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) |
| C5G6D7 | 6.24e-77 | 276 | 24 | 35 | 1053 | 1 | chonabc | Chondroitin sulfate ABC exolyase | Bacteroides thetaiotaomicron |
| Q9AQS0 | 5.43e-11 | 70 | 22 | 15 | 361 | 1 | xly | Xanthan lyase | Bacillus sp. (strain GL1) |
| Q59288 | 6.97e-11 | 70 | 23 | 13 | 335 | 1 | cslA | Chondroitinase-AC | Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) |
| A0A3D9VCI6 | 2.03e-06 | 55 | 21 | 10 | 280 | 1 | tchly8B | Hyaluronate lyase | Thermasporomyces composti |
| Source | Proteus mirabilis HI4320 |
|---|---|
| Locus tag | PMI_RS10485 |
| Feature type | CDS |
| Gene | - |
| Product | chondroitinase family polysaccharide lyase |
| Location | 2303840 - 2306905 (strand: 1) |
| Length | 3066 (nucleotides) / 1021 (amino acids) |
| Accession | NC_010554 |
|---|---|
| Length | 4063606 nucleotides |
| Topology | circular |
| Plasmid | False |
| Orthogroup | group_3904 | |
|---|---|---|
| Orthogroup size | 2 | |
| N. genomes | 1 |
| KO | Description | Pathways | Modules |
|---|---|---|---|
| K08961 | chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21] | - | - |
MPIFRFTALAMTLGLLSTPYHVIAATSNPAFDPNHLMQSEIYHFAQSDPLADFSSDKNSTLTLSDKRSIMGNQSLLWQWKGGSSFTLHKKLIVPTDKEASKAWGRASTPVLSFWLYNEKPIDGYLTVDLGEKLNATSEAQAGFKVKLNFTGWRAIGISLNNDLENREMTLNATNTSSDGTQDSIGRSLGANVDSIRFKAPSNISQGEIYIDRIMFSIDDARYQWSDYQIKTRLSEPEIEFHTVQPQLPVTPENLAAIDLIRQRLINEFVGGEKETNLALEENISKLKTDFEALNIRPLSDGGMQGRHLITDKQTIIYQPEQLNSQDKQLFDNYVILGNYTTLMFNISRAYVLEKDPTQKEQLKQMYLLMTKHLLDQGFVKGSALVTTHHWGYSSRWWYISTLLMADALKEANLQTEVYDSLLWYSREFKSSFDMKVGANSSDLDYFNTLSRQHLALLLLEPDDQKRINLVNSFSHYITGALTQVPPGSKDGLRPDGTAWRHEGNYPGYSFPAFKNASQLIYLLRETPFAVGESGWNNLKKAMISAWIYSNPEVGLPLAGRHPFNSPSLQSIAQGYYWLAMSAQPAPDKQLASIYLAISGKSRNESPTIFGEEITPASLPQGFYAFNGGAFGIHRWQDKMVTLKAYNTNVWSSEIYNKDNRYGRYQSHGVAQIVRNGSQLSQGYQQEGWDWNRMPGATTIHLPLKELDSPNPHTLMQRGERGFSGTSALEGKYGMMAFDLLYPANLARFDANFTAKKTVLAADNHLIFVGSNINSSDKDHPVETTLFQHAITPELNTIWINGQKIEGFPYQTTLKQGDWIIDSNGNGYLITQAEKVNVSRQHQTSAENKNRQPTQGNFSSAWIDHGIQPKDHSYEYMVFLDATPEKMAQLAEKFRANNGLYQVIRKDKDVHIIYDKLSQITGYAFYQPAVIDDKWIKKVDKPSIVMTHQEGNILTVSAVTPDLNMTRQKAATPVTINVTVKGKWQPTAQDSEVKYNVSGDNTELIFTSYFGIPQEIKLSPLS
AAGGGCGTATCGGCTTTACTGTTAGCCAGCGTTTCTAAGGAGAAAATATAATGCCGATATTTCGTTTTACTGCGCTTGCAATGACATTGGGGTTATTATCAACCCCCTATCATGTTATTGCTGCTACCAGCAATCCTGCATTTGATCCCAATCATCTTATGCAATCAGAAATCTATCATTTTGCACAAAGTGATCCATTAGCTGATTTTTCATCAGATAAAAATTCAACACTAACTTTATCTGATAAACGTAGCATTATGGGAAACCAATCCCTTTTATGGCAATGGAAAGGTGGCAGTAGTTTTACTTTACATAAAAAGCTTATAGTTCCCACAGATAAAGAAGCCTCTAAAGCATGGGGACGCGCTTCTACACCTGTTTTATCATTTTGGCTTTACAACGAAAAACCTATTGATGGTTATCTCACTGTTGATTTAGGGGAAAAGCTCAATGCCACCAGCGAAGCCCAAGCTGGCTTTAAAGTAAAACTAAATTTCACTGGCTGGCGTGCTATTGGTATCTCTTTAAATAACGATCTTGAAAATCGTGAGATGACTTTAAATGCAACAAATACATCATCCGATGGTACTCAAGATAGTATTGGTCGCTCTTTAGGTGCGAATGTTGACAGCATTCGTTTTAAAGCCCCTTCTAATATCAGTCAGGGTGAAATTTATATCGACCGTATTATGTTTTCTATTGATGACGCCCGTTACCAATGGTCTGATTATCAAATAAAAACACGATTATCAGAGCCGGAAATTGAATTTCACACCGTACAACCTCAATTACCTGTAACACCAGAAAATTTAGCTGCGATAGATCTTATTCGCCAACGTCTTATCAATGAATTTGTTGGTGGTGAAAAAGAGACGAATCTTGCTTTAGAAGAGAATATCAGCAAGCTAAAAACGGATTTTGAGGCACTGAATATTCGCCCTCTTTCGGATGGAGGAATGCAAGGTCGACATCTTATCACCGATAAACAAACTATCATCTATCAGCCAGAACAGCTTAATTCTCAAGACAAGCAACTTTTTGATAATTACGTCATTCTTGGTAACTACACCACATTAATGTTTAATATTAGCCGTGCTTATGTGCTCGAAAAAGATCCAACACAAAAAGAACAGCTAAAACAGATGTACCTCTTGATGACCAAGCATCTATTAGATCAAGGATTTGTCAAAGGTAGTGCCCTAGTAACCACTCACCACTGGGGATATAGTTCACGTTGGTGGTATATCTCTACATTATTAATGGCTGATGCACTAAAAGAAGCTAATCTACAGACAGAAGTCTATGATTCTCTACTTTGGTATTCACGAGAATTTAAAAGTAGTTTTGATATGAAAGTTGGCGCAAATAGCTCTGATTTAGACTATTTTAATACCTTATCTCGTCAACATTTAGCGCTATTATTACTTGAACCCGATGATCAAAAACGTATTAACTTAGTCAATTCTTTTAGTCATTATATCACTGGTGCCTTAACTCAAGTACCACCGGGGAGTAAAGACGGTTTGCGTCCTGATGGTACGGCATGGCGACATGAAGGTAATTATCCCGGCTACTCTTTCCCAGCATTTAAAAATGCCTCACAGCTGATTTATTTATTACGAGAAACACCTTTTGCTGTAGGTGAAAGTGGCTGGAATAACCTAAAAAAGGCAATGATTTCAGCATGGATCTATAGTAATCCTGAAGTTGGCTTACCTTTAGCGGGAAGACACCCCTTTAACTCACCTTCCCTACAATCTATAGCACAAGGTTACTATTGGCTCGCGATGTCTGCCCAACCAGCGCCAGATAAACAGTTAGCATCTATTTATTTAGCAATTAGTGGTAAATCGCGAAATGAATCTCCCACTATTTTTGGTGAAGAGATAACGCCAGCGTCCCTTCCTCAAGGGTTCTATGCCTTTAACGGTGGTGCCTTTGGTATTCACCGTTGGCAAGACAAAATGGTGACATTAAAAGCCTATAATACCAATGTATGGTCATCTGAAATTTACAATAAAGATAACCGTTATGGCCGTTATCAAAGTCATGGTGTTGCTCAAATCGTTCGCAATGGCTCTCAACTTTCACAAGGCTATCAGCAAGAAGGCTGGGATTGGAATAGAATGCCTGGCGCCACAACCATTCATCTTCCGCTTAAAGAACTTGATAGCCCTAACCCACACACCTTGATGCAACGAGGTGAGCGAGGATTTAGCGGCACATCAGCCCTTGAAGGAAAATATGGCATGATGGCGTTTGATCTTCTTTATCCCGCTAATCTTGCGCGTTTTGATGCTAACTTTACCGCTAAAAAAACCGTCTTAGCGGCGGATAACCATTTAATTTTTGTCGGTAGCAATATTAATAGCAGCGATAAAGATCACCCTGTGGAAACAACGTTATTCCAACATGCTATTACGCCTGAGTTAAACACTATTTGGATTAATGGCCAAAAAATAGAAGGTTTTCCTTATCAAACTACGCTAAAACAAGGAGATTGGATAATCGATAGTAATGGTAACGGTTATTTAATTACTCAAGCAGAAAAAGTGAATGTCAGCCGCCAACACCAGACTTCGGCTGAAAATAAAAATCGTCAACCCACGCAAGGAAATTTTAGCTCCGCATGGATCGACCACGGTATTCAACCCAAAGATCATAGTTATGAGTACATGGTTTTCTTAGATGCAACACCGGAAAAAATGGCGCAATTAGCCGAGAAATTCCGTGCTAACAATGGGTTATACCAAGTTATTCGTAAAGATAAAGATGTACATATTATTTACGATAAACTCAGTCAAATAACAGGTTATGCATTTTATCAACCAGCAGTCATTGACGATAAATGGATCAAAAAAGTCGATAAGCCGTCCATCGTTATGACACATCAGGAAGGAAATATACTGACGGTGAGTGCTGTAACACCTGATTTAAATATGACTCGCCAAAAAGCGGCAACCCCCGTCACCATTAATGTGACAGTGAAAGGGAAATGGCAACCCACAGCTCAAGACAGTGAGGTAAAATATAACGTTTCTGGGGATAATACCGAACTTATTTTCACCAGTTACTTTGGCATTCCACAAGAAATTAAACTCTCTCCTCTCTCTTGATTAAACCTTTAAAGGAGCGCATTCGCGTTCCTTTTTTATTTTGCAGGAAA
