Orthogroup:group_3845


Homologs in group_3845

Help

2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS09150 F4V73_RS09150 Morganella psychrotolerans - PTS lactose/cellobiose transporter subunit IIA
PMI_RS14605 PMI_RS14605 Proteus mirabilis HI4320 chbA PTS N,N'-diacetylchitobiose transporter subunit IIA

Distribution of group_3845 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of the RefSeq best hits of group_3845

Orthogroup content: 2 members

Help

This page summarizes the annotation of all members of the orthologous group group_3845.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1
2 chbA 1

Product

# Product Occurence
1 PTS lactose/cellobiose transporter subunit IIA 1
2 PTS N,N'-diacetylchitobiose transporter subunit IIA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1447 2 G Carbohydrate transport and metabolism (G) Phosphotransferase system cellobiose-specific component IIA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02759 2 cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] Starch and sucrose metabolism
Phosphotransferase system (PTS)		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02255 2 PTS system, Lactose/Cellobiose specific IIA subunit

Annotations of the 21 SwissProt hits

Annotation Number of occurrences
Lichenan-specific phosphotransferase enzyme IIA component 1
PTS system N,N'-diacetylchitobiose-specific EIIA component 4
PTS system cellobiose-specific EIIA component 2
PTS system galactose-specific EIIA component 1
PTS system lactose-specific EIIA component 12
PTS system oligo-beta-mannoside-specific EIIA component 1

Protein length

Min length 112
Max length 115
Mean length (sd) 113.5 (2.1)
Median length 113.5

Protein length distribution