Orthogroup:group_3745


Homologs in group_3745

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2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12530 FBDBKF_12530 Morganella morganii S1 rcnA ABC-type nickel/cobalt efflux system, permease component RcnA
F4V73_RS07760 F4V73_RS07760 Morganella psychrotolerans - nickel/cobalt efflux protein RcnA

Distribution of group_3745 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3745

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3745.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rcnA 1
2 - 1

Product

# Product Occurence
1 ABC-type nickel/cobalt efflux system, permease component RcnA 1
2 nickel/cobalt efflux protein RcnA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2215 2 P Inorganic ion transport and metabolism (P) ABC-type nickel/cobalt efflux system, permease component RcnA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K08970 2 nickel/cobalt transporter (NicO) family protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03824 2 High-affinity nickel-transport protein

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
Nickel/cobalt efflux system RcnA 15
Putative nickel/cobalt efflux system MJ1092 1
Repetin 1
Uncharacterized protein PFD1115c 1

Protein length

Min length 282
Max length 292
Mean length (sd) 287.0 (7.1)
Median length 287.0

Protein length distribution