Homologs in group_3745

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS04485 PMI_RS04485 28.4 Proteus mirabilis HI4320 - AAA family ATPase

Distribution of the homologs in the orthogroup group_3745

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3745

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17790
Feature type CDS
Gene -
Product AAA family ATPase
Location 3802 - 6360 (strand: -1)
Length 2559 (nucleotides) / 852 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000008
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3745
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF13166 AAA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4694 Translation, ribosomal structure and biogenesis (J) J Wobble nucleotide-excising tRNase

Protein Sequence

MDIKTDICTWLLKQQEWFQVLAENLIAKGSLSVEDINCIVALIKTPEGQSVTKNRTFDGLASPEANDDTLRIIKIDTVRGIENLAPRIPLDFGTGNLTVIYGHNGSGKSSYTRVLKRVSGKPRAAPLKPNVFQPTPPEQSCHITWEINGVSESESWTSNSAAINALKVIDIFDTDEAQHYLTQESTATYIPSVVSFFEKLAQYTKIIREKLSSEQGLLVSQLPMLPDSYRRCIISGNYSALGGVSAENISIMTNWSDVDEQMLKVLNERLSVQDPTEHARQKLALRTSVIQIITKLEQTARAFSVSGIDTIRALRADARTKRIAAQESQKIKDGSLEGVGTSTWRAMWEAARIYSQLPYPDVAFPVTAGASCLLCNQELSAEAQQRLVNFEAFVQSRIEIEANAAEDYYVRALSNLMVSPSTSEIATLCAGAALPDQWKEYLSSIWTLASASRQSLIEHEAIQNAQPIPDLSDAITKLIVYRDKLQGEADQFQKDAAGFDKAKAILDKNEAEARKWVASQKESIEAESVRLRRYDDYDKWIGFTNSRFISLKSTDVTQKVVTDAYAARFNQELRALGAGTIQVELVKIRTENAKVLHQLQLIGVQRDKPHNVLSEGERRIISLAAFLADVSDRPGSAPFIFDDPISSLDHDFEWHVAKRLVELAKSRQVIILTHRLSLFGVIEDLAKKEGDVWKKQHHLSICIESYNGVAGQPADQAAWNANTRSANNILLEKLSKAFQIGEEHGAEAYRGLAQGICSDFRKLIERSVEEDLLNGIVLRHRRGIQTDGRLQHIPSISLEDCKLIESLMTKYSCFEHSQSTEVPIFIPEFSELQADLTCLKEWREQLKKRRTQ

Flanking regions ( +/- flanking 50bp)

TACGGATTGATGCTGACTTTTTTGAACAGTGATCCCAGAGAGTGATAATTATGGATATAAAAACGGATATCTGTACATGGCTGCTTAAACAGCAGGAATGGTTCCAGGTTCTTGCGGAAAATCTTATCGCTAAAGGTAGTTTGTCAGTTGAAGATATCAACTGTATAGTTGCTTTGATTAAAACTCCAGAAGGTCAAAGTGTTACGAAGAATCGAACATTTGATGGACTTGCATCTCCGGAGGCAAATGACGATACTCTCCGGATCATCAAAATTGATACAGTTCGAGGAATCGAAAATCTCGCTCCTCGTATACCTCTTGACTTTGGTACAGGTAATCTCACAGTTATTTATGGCCACAATGGTTCAGGTAAATCTAGTTACACTCGGGTGCTGAAACGTGTATCAGGTAAGCCTCGAGCCGCCCCATTAAAGCCAAATGTCTTTCAGCCGACGCCACCCGAACAAAGTTGTCATATTACGTGGGAAATAAATGGTGTTAGTGAGAGTGAAAGCTGGACATCCAATAGCGCCGCTATCAATGCTCTTAAGGTGATCGATATTTTTGACACTGATGAGGCTCAACATTATCTCACTCAAGAAAGCACCGCTACCTATATTCCAAGTGTAGTGAGTTTTTTTGAAAAATTAGCCCAGTATACAAAAATTATTCGTGAAAAACTTAGCAGCGAGCAGGGATTACTAGTGAGCCAACTTCCTATGCTTCCTGACTCTTATCGGCGCTGTATTATCTCTGGGAATTATAGCGCATTAGGAGGTGTCAGCGCCGAGAATATCTCGATAATGACCAATTGGTCAGATGTCGATGAACAGATGCTGAAAGTACTAAATGAACGACTCAGTGTGCAAGATCCTACTGAACACGCTCGACAAAAATTGGCTCTACGTACCTCTGTTATACAAATCATAACCAAACTGGAACAAACGGCACGTGCGTTTAGTGTATCTGGTATCGATACAATTCGAGCCTTGAGAGCTGATGCAAGGACAAAACGTATTGCCGCACAGGAAAGTCAAAAAATTAAAGATGGTTCTCTTGAGGGGGTTGGTACTTCGACATGGAGAGCTATGTGGGAAGCCGCTCGGATATATTCACAGCTGCCTTATCCCGATGTAGCGTTTCCTGTTACAGCCGGAGCGAGCTGTTTGCTTTGTAATCAGGAACTATCCGCAGAGGCGCAACAAAGGTTAGTAAATTTTGAAGCATTCGTGCAATCCCGTATCGAGATCGAGGCTAACGCGGCAGAAGATTATTATGTGCGTGCACTCAGTAATTTAATGGTTTCTCCTTCCACGTCTGAGATTGCTACTCTTTGCGCTGGTGCTGCCCTCCCTGACCAGTGGAAGGAGTACTTGTCAAGTATATGGACCTTAGCATCAGCTTCTCGTCAATCATTAATTGAACACGAAGCGATTCAGAATGCGCAACCAATACCTGATTTGAGTGATGCGATAACAAAATTAATTGTATATCGCGATAAACTTCAGGGTGAAGCTGACCAATTTCAAAAGGATGCTGCTGGATTTGACAAAGCTAAAGCGATACTGGACAAAAATGAAGCAGAGGCTCGTAAGTGGGTCGCTAGTCAAAAAGAATCAATTGAGGCTGAATCAGTTAGGCTTAGAAGATATGACGACTACGATAAATGGATAGGATTTACCAATTCCCGTTTTATTTCATTAAAATCTACTGATGTAACTCAAAAAGTAGTAACGGACGCCTATGCCGCGAGGTTTAATCAGGAATTGAGAGCGCTAGGAGCCGGCACTATTCAGGTTGAGCTTGTGAAAATCAGGACTGAAAATGCGAAGGTTTTACACCAGCTACAATTGATTGGCGTTCAGAGAGATAAGCCGCATAACGTTCTTAGTGAGGGGGAAAGGCGAATTATTTCGTTAGCGGCATTCTTAGCTGACGTAAGTGATAGGCCAGGATCTGCTCCATTTATTTTTGATGACCCTATTTCTTCACTGGATCATGATTTTGAGTGGCATGTTGCGAAGAGATTGGTGGAGCTTGCAAAATCTCGTCAGGTTATTATTTTGACACACAGATTGTCTCTTTTTGGTGTAATAGAGGATTTGGCTAAAAAAGAAGGCGATGTGTGGAAAAAACAGCATCATCTCTCTATATGTATCGAATCTTACAACGGTGTCGCCGGCCAACCAGCTGATCAGGCTGCTTGGAACGCAAATACTAGATCAGCTAATAATATTCTTCTAGAAAAATTGAGTAAGGCTTTCCAGATTGGTGAAGAACATGGAGCAGAAGCATATCGTGGGCTAGCTCAAGGCATTTGTAGTGATTTTCGAAAACTTATTGAACGCTCTGTTGAAGAGGACTTACTTAATGGGATTGTTTTACGGCACCGCCGAGGCATTCAAACAGATGGGAGGCTTCAGCATATACCAAGTATTTCTTTAGAGGATTGTAAATTAATCGAAAGTCTGATGACTAAATACAGTTGTTTCGAACACAGTCAATCAACCGAAGTGCCTATTTTCATCCCTGAATTTTCAGAGTTGCAAGCTGACCTCACTTGTTTAAAGGAATGGCGCGAGCAACTTAAAAAGCGGCGGACACAATAGAAATATAGTGACTAAAACCACCTCAGCGTTGACGTTTTCTATAAGTGCGA