Orthogroup:group_3738


Homologs in group_3738

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS06560 PMI_RS06560 Proteus mirabilis HI4320 - Ail/Lom family outer membrane beta-barrel protein
PMI_RS06595 PMI_RS06595 Proteus mirabilis HI4320 - outer membrane beta-barrel protein
PMI_RS14585 PMI_RS14585 Proteus mirabilis HI4320 - Ail/Lom family outer membrane beta-barrel protein

Distribution of group_3738 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3738 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3738

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3738.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 3

Product

# Product Occurence
1 Ail/Lom family outer membrane beta-barrel protein 2
2 outer membrane beta-barrel protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3637 3 M Cell wall/membrane/envelope biogenesis (M) Opacity protein LomR and related surface antigens

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K16078 1 attachment invasion locus protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13505 3 Outer membrane protein beta-barrel domain

Annotations of the 10 SwissProt hits

Annotation Number of occurrences
Attachment invasion locus protein 2
Outer membrane protein X 5
Outer membrane protein lom 1
Putative protein LomR 1
Virulence membrane protein PagC 1

Protein length

Min length 178
Max length 188
Mean length (sd) 184.0 (5.3)
Median length 186.0

Protein length distribution