Orthogroup:group_3688



Homologs in group_3688

Help

4 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
F4V73_RS01050 F4V73_RS01050 Morganella psychrotolerans - fimbrial protein
PMI_RS02635 PMI_RS02635 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS05720 PMI_RS05720 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS13465 PMI_RS13465 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_3688 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_3688 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3688

Orthogroup content: 4 members

Help

This page summarizes the annotation of all members of the orthologous group group_3688.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 4

Product

# Product Occurence
1 fimbrial protein 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 4 N Cell motility (N) Pilin (type 1 fimbrial protein)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 4 Fimbrial protein

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042616 1 type 1 fimbrial protein VF1235 Adherence

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
F17a-G fimbrial adhesin 1
F17b-G fimbrial adhesin 1
F17c-G fimbrial adhesin 1
F17d-G fimbrial adhesin 1
F17e-G fimbrial adhesin 1
F17f-G fimbrial adhesin 1
F17g-G fimbrial adhesin 1
Minor fimbrial subunit HifE 2

Protein length

Min length 194
Max length 360
Mean length (sd) 313.0 (79.8)
Median length 349.0

Protein length distribution