Orthogroup:group_368


Homologs in group_368

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13485 FBDBKF_13485 Morganella morganii S1 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family
EHELCC_08610 EHELCC_08610 Morganella morganii S2 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family
NLDBIP_08935 NLDBIP_08935 Morganella morganii S4 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family
LHKJJB_05330 LHKJJB_05330 Morganella morganii S3 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family
HKOGLL_05585 HKOGLL_05585 Morganella morganii S5 tcyP L-cystine transporter TcyP, sodium:dicarboxylate symporter family
F4V73_RS03280 F4V73_RS03280 Morganella psychrotolerans - L-cystine transporter
PMI_RS04950 PMI_RS04950 Proteus mirabilis HI4320 - L-cystine transporter
PMI_RS18415 PMI_RS18415 Proteus mirabilis HI4320 sstT serine/threonine transporter SstT

Distribution of group_368 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_368 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_368

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_368.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tcyP 5
2 - 2
3 sstT 1

Product

# Product Occurence
1 L-cystine transporter TcyP, sodium:dicarboxylate symporter family 5
2 L-cystine transporter 2
3 serine/threonine transporter SstT 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1823 7 E Amino acid transport and metabolism (E) L-cystine transporter TcyP, sodium:dicarboxylate symporter family
COG3633 1 E Amino acid transport and metabolism (E) Na+/serine and Na+/threonine symporter SstT

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06956 7 uncharacterized protein - -
K07862 1 serine/threonine transporter - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00375 8 Sodium:dicarboxylate symporter family

Annotations of the 380 SwissProt hits

Annotation Number of occurrences
Aerobic C4-dicarboxylate transport protein 5
C4-dicarboxylate transport protein 153
C4-dicarboxylate transport protein 1 9
C4-dicarboxylate transport protein 2 9
C4-dicarboxylate transport protein 3 2
C4-dicarboxylate transport protein 4 1
Excitatory amino acid transporter 2
Excitatory amino acid transporter 1 5
Excitatory amino acid transporter 2 3
Excitatory amino acid transporter 3 5
Excitatory amino acid transporter 4 4
Excitatory amino acid transporter 5 2
Glutamate transporter homolog 1
L-cystine transporter TcyP 1
L-cystine uptake protein TcyP 9
Neutral amino acid transporter A 3
Neutral amino acid transporter B(0) 6
Proton/glutamate-aspartate symporter 2
Proton/sodium-glutamate symport protein 3
Putative sodium-dependent excitatory amino acid transporter glt-3 1
Putative sodium-dependent excitatory amino acid transporter glt-4 1
Putative sodium-dependent excitatory amino acid transporter glt-6 1
Serine/threonine transporter SstT 151
Uncharacterized symporter HI_1154 1

Protein length

Min length 417
Max length 464
Mean length (sd) 458.0 (16.6)
Median length 464.0

Protein length distribution