Orthogroup:group_3555


Homologs in group_3555

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18550 FBDBKF_18550 Morganella morganii S1 alpA AlpA family phage regulatory protein
EHELCC_01835 EHELCC_01835 Morganella morganii S2 alpA AlpA family phage regulatory protein
NLDBIP_01625 NLDBIP_01625 Morganella morganii S4 alpA AlpA family phage regulatory protein
LHKJJB_00410 LHKJJB_00410 Morganella morganii S3 alpA AlpA family phage regulatory protein
HKOGLL_00450 HKOGLL_00450 Morganella morganii S5 alpA AlpA family phage regulatory protein

Distribution of group_3555 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3555 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3555

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3555.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alpA 5

Product

# Product Occurence
1 AlpA family phage regulatory protein 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3311 5 KX Transcription (K)
Mobilome: prophages, transposons (X)		 DNA-binding transcriptional regulator AlpA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07733 5 prophage regulatory protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05930 5 Prophage CP4-57 regulatory protein (AlpA)

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
DNA-binding transcriptional activator AlpA 1
Uncharacterized protein ORF88 1

Protein length

Unique protein length 96

Protein length distribution