Homologs in group_3554

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18535 FBDBKF_18535 100.0 Morganella morganii S1 - XRE family transcriptional regulator
EHELCC_01850 EHELCC_01850 100.0 Morganella morganii S2 - XRE family transcriptional regulator
NLDBIP_01610 NLDBIP_01610 100.0 Morganella morganii S4 - XRE family transcriptional regulator
LHKJJB_00425 LHKJJB_00425 100.0 Morganella morganii S3 - XRE family transcriptional regulator

Distribution of the homologs in the orthogroup group_3554

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3554

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_00465
Feature type CDS
Gene -
Product XRE family transcriptional regulator
Location 78182 - 78772 (strand: -1)
Length 591 (nucleotides) / 196 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3554
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01381 Helix-turn-helix

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1396 Transcription (K) K Transcriptional regulator, contains XRE-family HTH domain

Protein Sequence

MKNINEIRRDNLIFILEKYYDGRQKALADALGFAPNIISRYLSSSDLKSHRNISDAVARKIEHVTRVQKYWMDTDHYNRPAESTDDIYSPTEIGAILADNISTFMLTDGVKSQTQLSVKSGLGQSTINRIVKNETSATVDSVDSIAKALGRKAYELLIPSNDTDVIKYDQKRYAALSPAEKEQIQDFIEFIIKKNR

Flanking regions ( +/- flanking 50bp)

TGACGGAATCAGATAAACATTTACGAATACATTTTAATCAGGCAACCCATATGAAAAACATCAATGAGATAAGGAGAGATAACCTCATCTTCATTCTGGAGAAGTATTACGACGGCAGACAGAAAGCGCTGGCCGATGCGCTGGGGTTCGCCCCGAACATCATTTCCCGCTACCTTTCCTCATCCGATTTGAAGAGCCACCGTAATATCAGTGACGCGGTTGCCAGGAAGATAGAGCATGTCACGCGGGTACAAAAATACTGGATGGATACCGACCATTACAACCGGCCGGCAGAAAGCACCGACGATATCTATTCACCGACCGAGATCGGCGCAATACTGGCAGATAACATCAGTACCTTTATGCTGACAGACGGCGTGAAGTCACAGACTCAACTGTCTGTTAAAAGCGGGCTGGGACAGTCAACGATTAACCGTATCGTGAAGAATGAAACCAGTGCCACCGTGGACAGCGTGGACTCCATTGCCAAGGCGCTGGGCCGTAAAGCCTACGAACTACTGATCCCGTCCAACGATACCGACGTCATTAAGTATGACCAGAAACGGTATGCTGCACTGTCACCGGCAGAGAAAGAACAGATCCAGGACTTTATCGAGTTCATCATAAAGAAAAACCGGTAATAAACTCAGACAGATGCGAAATCGGCCAGCCTCGAGCTGGCTTTTTTTCG