Orthogroup:group_3504


Homologs in group_3504

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17345 FBDBKF_17345 Morganella morganii S1 gcd14 tRNA A58 N-methylase Trm61
EHELCC_01545 EHELCC_01545 Morganella morganii S2 gcd14 tRNA A58 N-methylase Trm61
NLDBIP_01915 NLDBIP_01915 Morganella morganii S4 gcd14 tRNA A58 N-methylase Trm61
LHKJJB_00120 LHKJJB_00120 Morganella morganii S3 gcd14 tRNA A58 N-methylase Trm61
HKOGLL_00160 HKOGLL_00160 Morganella morganii S5 gcd14 tRNA A58 N-methylase Trm61

Distribution of group_3504 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_3504 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3504

Orthogroup content: 5 members

Help

This page summarizes the annotation of all members of the orthologous group group_3504.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gcd14 5

Product

# Product Occurence
1 tRNA A58 N-methylase Trm61 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2230 5 I Lipid transport and metabolism (I) Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13649 5 Methyltransferase domain
PF13847 5 Methyltransferase domain

Annotations of the 195 SwissProt hits

Annotation Number of occurrences
(S)-tetrahydroprotoberberine N-methyltransferase 1
(S)-tetrahydroprotoberberine N-methyltransferase 1 1
2-phytyl-1,4-naphtoquinone methyltransferase 1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 6
Aklanonic acid methyltransferase DauC 1
Cypemycin N-terminal methyltransferase 1
Demethylmenaquinone methyltransferase 3
Pavine N-methyltransferase 1
Phosphoethanolamine N-methyltransferase 1 1
Phosphoethanolamine N-methyltransferase 2 1
Phosphoethanolamine N-methyltransferase 3 1
Probable S-adenosyl-L-methionine-dependent methyltransferase TehB 2
Probable cycloartenol-C-24-methyltransferase 1 1
Probable fatty acid methyltransferase Rv3720 1
Putative methyltransferase GWCH70_2453 1
Putative methyltransferase YqeM 1
Ribosomal RNA small subunit methyltransferase G 4
Ribosomal protein L11 methyltransferase 17
S-adenosyl-L-methionine-dependent Diels-Alderase iccD 1
Trans-aconitate 2-methyltransferase 1
Ubiquinone biosynthesis O-methyltransferase 145
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE 1
Uncharacterized 37.1 kDa protein in transposon TN4556 1
Uncharacterized protein YjhP 1

Protein length

Unique protein length 545

Protein length distribution