COG4461


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4461, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Lysozyme inhibitor LprI
Function(s) descr. Defense mechanisms (V)

Occurence in the database

COG4461 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3500 FBDBKF_17310 39135 39821 -1 lprI Lysozyme inhibitor LprI Morganella morganii S1
1 group_3500 EHELCC_01580 315680 316366 1 lprI Lysozyme inhibitor LprI Morganella morganii S2
2 group_3500 NLDBIP_01880 363770 364456 -1 lprI Lysozyme inhibitor LprI Morganella morganii S4
3 group_3500 LHKJJB_00155 28229 28915 1 lprI Lysozyme inhibitor LprI Morganella morganii S3
4 group_3500 HKOGLL_00195 33740 34426 1 lprI Lysozyme inhibitor LprI Morganella morganii S5