Orthogroup:group_3253


Homologs in group_3253

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05715 FBDBKF_05715 Morganella morganii S1 rhtB homoserine/homoserine lactone efflux protein
EHELCC_11875 EHELCC_11875 Morganella morganii S2 rhtB homoserine/homoserine lactone efflux protein
NLDBIP_12215 NLDBIP_12215 Morganella morganii S4 rhtB homoserine/homoserine lactone efflux protein
LHKJJB_12075 LHKJJB_12075 Morganella morganii S3 rhtB homoserine/homoserine lactone efflux protein
HKOGLL_10690 HKOGLL_10690 Morganella morganii S5 rhtB homoserine/homoserine lactone efflux protein

Distribution of group_3253 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3253 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3253

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3253.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhtB 5

Product

# Product Occurence
1 homoserine/homoserine lactone efflux protein 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1280 5 E Amino acid transport and metabolism (E) Threonine/homoserine/homoserine lactone efflux protein

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05834 5 homoserine/homoserine lactone efflux protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01810 5 LysE type translocator

Annotations of the 50 SwissProt hits

Annotation Number of occurrences
Cysteine/O-acetylserine efflux protein 17
Homoserine/homoserine lactone efflux protein 6
Leucine efflux protein 17
Putative leucine efflux protein 1
Threonine efflux protein 4
Uncharacterized membrane protein PA4757 1
Uncharacterized membrane protein VC_0136 1
Uncharacterized membrane protein YahN 1
Uncharacterized membrane protein YrhP 1
Uncharacterized membrane protein slr1627 1

Protein length

Unique protein length 206

Protein length distribution