Homologs in group_3223

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03005 FBDBKF_03005 100.0 Morganella morganii S1 virK DUF535 domain-containing protein
NLDBIP_07855 NLDBIP_07855 100.0 Morganella morganii S4 virK DUF535 domain-containing protein
LHKJJB_07390 LHKJJB_07390 100.0 Morganella morganii S3 virK DUF535 domain-containing protein
HKOGLL_03540 HKOGLL_03540 100.0 Morganella morganii S5 virK DUF535 domain-containing protein

Distribution of the homologs in the orthogroup group_3223

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3223

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75829 7.53e-72 228 43 2 280 4 ybjX Uncharacterized protein YbjX Escherichia coli (strain K12)
Q57144 6.63e-18 85 31 5 159 1 HI_0461 Uncharacterized protein HI_0461 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57273 9e-12 68 28 4 137 4 HI_1119 Uncharacterized protein HI_1119 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_07530
Feature type CDS
Gene virK
Product DUF535 domain-containing protein
Location 241645 - 242595 (strand: -1)
Length 951 (nucleotides) / 316 (amino acids)
In genomic island -

Contig

Accession ZDB_216
Length 269970 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3223
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF04393 Protein of unknown function (DUF535)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2990 Function unknown (S) S Outer membrane protein VirK/YbjX involved in antimicrobial peptide resistance, DUF535 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09824 uncharacterized protein - -

Protein Sequence

MSGLLLFKQLLTKECCPGMHWDSARNRLKFAARSLFMPLSTMKYLSGLTNTACCDAILKKQPLLPTKLQRPYLSINFHRKNKSAAICDHYRITKAVLPPAVFSRIYSNEQFYLCPVEGKESLCHLWLDVQDAFNKEGELTLEMRDDAGEILARSAFTLLNLNEKRSLFIGALQGGVSEQAHNAIRAATKNCHGVFPKRILTEVICLIASLFQCQQIIATSNETHIYRSRRYRHKKLTQWVADYNSFWESVGGTANPQHEYVIPLTLPRKPIDEIASKKRAEYRRRYQLLDNVAQAVCERLQLPQPENKTDVQHNII

Flanking regions ( +/- flanking 50bp)

TGGGTGAATTGTTTCACTGTGTAATAATTTCATTCATTAAAGGCACTACTATGTCCGGCCTCCTGCTGTTCAAACAACTACTCACCAAAGAATGCTGTCCCGGTATGCACTGGGACTCCGCCCGTAACCGCTTAAAATTCGCGGCCCGCAGCCTGTTTATGCCGCTGTCCACCATGAAATACCTGTCCGGCCTGACAAACACTGCCTGCTGTGATGCTATTCTGAAAAAGCAGCCGCTGCTGCCGACCAAATTACAGCGCCCGTATCTGAGCATTAATTTTCACCGCAAAAATAAATCGGCGGCTATCTGCGACCATTACCGGATCACCAAAGCCGTTCTGCCACCGGCTGTATTCAGCCGTATCTACAGCAATGAGCAGTTTTATCTCTGCCCGGTTGAAGGAAAAGAGAGCCTCTGTCACCTCTGGCTGGATGTGCAGGATGCATTTAACAAAGAGGGCGAGCTGACGCTGGAAATGCGGGATGATGCCGGTGAGATCCTGGCCCGCAGTGCATTCACCCTGCTGAACCTGAATGAAAAACGGTCACTGTTTATCGGCGCGCTCCAGGGCGGCGTCAGTGAGCAGGCTCACAATGCTATCCGGGCGGCGACCAAAAACTGTCACGGTGTATTCCCGAAACGCATTCTGACGGAAGTTATCTGCCTTATCGCCTCACTGTTTCAGTGTCAGCAGATTATTGCCACCAGTAATGAGACCCATATTTACCGCAGCCGCCGTTACCGCCATAAAAAACTGACACAATGGGTGGCCGATTATAATTCGTTCTGGGAATCTGTCGGTGGCACCGCCAATCCGCAGCACGAATATGTAATACCGCTGACCCTGCCGCGTAAACCCATTGATGAAATAGCCAGTAAAAAACGTGCCGAATACCGCCGCCGTTATCAGTTACTGGATAATGTGGCGCAGGCCGTCTGTGAACGCCTGCAACTGCCGCAGCCGGAAAATAAAACAGATGTTCAACATAACATTATTTAAGAAAAATCCTTCATTTACAGCAGGTTTGACCGGTAATTGACATTTCATTA