Orthogroup:group_3148


Homologs in group_3148

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00250 FBDBKF_00250 Morganella morganii S1 - HTH cro/C1-type domain-containing protein
EHELCC_01295 EHELCC_01295 Morganella morganii S2 - HTH cro/C1-type domain-containing protein
NLDBIP_02165 NLDBIP_02165 Morganella morganii S4 - HTH cro/C1-type domain-containing protein
LHKJJB_03680 LHKJJB_03680 Morganella morganii S3 - HTH cro/C1-type domain-containing protein
HKOGLL_03365 HKOGLL_03365 Morganella morganii S5 - HTH cro/C1-type domain-containing protein

Distribution of group_3148 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3148 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3148

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3148.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5

Product

# Product Occurence
1 HTH cro/C1-type domain-containing protein 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 5 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 5 Helix-turn-helix

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator PrtR 1
HTH-type transcriptional regulator RdgA 1
HTH-type transcriptional regulator for conjugative element R391 1
HTH-type transcriptional regulator for conjugative element SXT 1
HTH-type transcriptional regulator for conjugative element pMERPH 1
Regulatory protein cro 1
Repressor protein CI 1
Repressor protein CI (Fragment) 1

Protein length

Unique protein length 68

Protein length distribution