Orthogroup:group_3118



Homologs in group_3118

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19775 FBDBKF_19775 Morganella morganii S1 - Amino acid decarboxylase
EHELCC_10870 EHELCC_10870 Morganella morganii S2 - Amino acid decarboxylase
NLDBIP_11215 NLDBIP_11215 Morganella morganii S4 - Amino acid decarboxylase
LHKJJB_10140 LHKJJB_10140 Morganella morganii S3 - Amino acid decarboxylase
HKOGLL_16305 HKOGLL_16305 Morganella morganii S5 - Amino acid decarboxylase
PMI_RS12935 PMI_RS12935 Proteus mirabilis HI4320 - Orn/Lys/Arg decarboxylase N-terminal domain-containing protein

Distribution of group_3118 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3118 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3118

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3118.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 Amino acid decarboxylase 5
2 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 1

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03709 6 Orn/Lys/Arg decarboxylase, N-terminal domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Constitutive ornithine decarboxylase 1
Inducible ornithine decarboxylase 1
Ornithine decarboxylase 1

Protein length

Unique protein length 103

Protein length distribution