Orthogroup:group_3102


Homologs in group_3102

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19565 FBDBKF_19565 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_16510 EHELCC_16510 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_16720 NLDBIP_16720 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_16750 LHKJJB_16750 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_18865 HKOGLL_18865 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS18565 F4V73_RS18565 Morganella psychrotolerans - helix-turn-helix transcriptional regulator

Distribution of group_3102 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3102 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3102

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3102.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5
2 - 1

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5
2 helix-turn-helix transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 6 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18830 1 HTH-type transcriptional regulator / antitoxin PezA - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 6 Helix-turn-helix

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
Antitoxin PezA 1
HTH-type transcriptional regulator Xre 1
Putative HTH-type transcriptional regulatory protein PF1851 1
Putative HTH-type transcriptional regulatory protein PH1808 1
Putative HTH-type transcriptional regulatory protein PYRAB03670 1
Putative HTH-type transcriptional regulatory protein TGAM_1316 1
Putative HTH-type transcriptional regulatory protein TK0539 1
Repressor protein C2 1
SPbeta prophage-derived uncharacterized HTH-type transcriptional regulator YonR 1
Uncharacterized HTH-type transcriptional regulator AF_1793 1
Uncharacterized HTH-type transcriptional regulator R00410 1
Uncharacterized HTH-type transcriptional regulator Smed_0045 1
Uncharacterized HTH-type transcriptional regulator y4aM 1
Uncharacterized HTH-type transcriptional regulator y4wC 1
Uncharacterized transcriptional regulator in ATPase CF(0) region 1

Protein length

Min length 110
Max length 117
Mean length (sd) 115.8 (2.9)
Median length 117.0

Protein length distribution