Homologs in group_3106

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19605 FBDBKF_19605 100.0 Morganella morganii S1 bamC Outer membrane protein assembly factor BamC
EHELCC_16895 EHELCC_16895 100.0 Morganella morganii S2 bamC Outer membrane protein assembly factor BamC
NLDBIP_17555 NLDBIP_17555 100.0 Morganella morganii S4 bamC Outer membrane protein assembly factor BamC
HKOGLL_17290 HKOGLL_17290 100.0 Morganella morganii S5 bamC Outer membrane protein assembly factor BamC
F4V73_RS10405 F4V73_RS10405 75.6 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_3106

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3106

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_17475
Feature type CDS
Gene bamC
Product Outer membrane protein assembly factor BamC
Location 13623 - 14615 (strand: -1)
Length 993 (nucleotides) / 330 (amino acids)

Contig

Accession ZDB_379
Length 55765 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3106
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MKRGVFLSVVIALLAGCKETPPPAPDGYYVIDDITVTYDNPADNAPENSDPEKNVKAAIRDTMISLKDSTFFWFEPGRVTVDNSGNRFDSDIHGDTFDLNNIQTTWTSPDSGQTVYLTTEKEGACGFFNCTLKMTLSRADHTSEKLAGMKAVSDVRAASYEAYLETQRQYYKENGFPPVPGDTIRMTENISVTLPETMAIDLKKQEGGDYVRDIGGLHIESDDDNTEIYRFRDPLSDAEGIIHLVKVPKYRWRFDEWLNQQKGIIYQEENGAIYYNRWGKPECTYFRYDQKERRYVIIVAETADQMMMQQMYSIARSAGKNPPPEAKSNK

Flanking regions ( +/- flanking 50bp)

TTTGCGCTATGATCACAACGGGTTTCCGGTGATTAAATAAAGGATGAGTCATGAAAAGGGGCGTATTTTTATCTGTGGTGATTGCATTGCTGGCCGGATGTAAGGAAACCCCGCCGCCTGCACCGGACGGATATTATGTGATTGATGATATTACCGTCACGTATGATAACCCGGCGGATAATGCGCCGGAGAACAGTGATCCGGAAAAAAATGTCAAAGCCGCCATCCGCGACACCATGATCAGCCTGAAAGACTCCACATTCTTCTGGTTTGAGCCGGGCAGAGTCACGGTGGATAACAGCGGCAACCGTTTTGACAGTGATATTCATGGCGATACCTTTGATCTGAATAATATACAGACGACCTGGACATCACCGGACAGCGGACAAACCGTCTATCTGACCACGGAAAAAGAGGGCGCGTGCGGCTTTTTTAACTGCACCCTGAAAATGACCCTTTCCCGCGCCGATCACACCTCCGAAAAACTGGCCGGAATGAAAGCGGTGTCTGATGTCAGAGCCGCCTCCTATGAAGCTTATCTGGAAACACAGCGTCAGTATTACAAAGAGAACGGCTTCCCGCCGGTTCCCGGTGACACCATCAGAATGACAGAAAATATCTCAGTCACCCTGCCGGAAACGATGGCTATCGACCTGAAAAAGCAGGAGGGCGGCGATTATGTCCGCGATATCGGCGGTCTTCATATTGAAAGCGATGATGATAATACGGAGATTTACCGCTTCCGGGATCCGCTCAGTGACGCGGAAGGTATTATTCATCTGGTGAAAGTCCCGAAATACCGCTGGCGTTTTGATGAATGGCTGAATCAGCAGAAAGGCATTATCTATCAGGAAGAGAACGGCGCGATCTATTACAACCGCTGGGGTAAGCCGGAATGCACCTATTTCCGCTATGACCAGAAAGAGCGGCGCTATGTGATTATTGTGGCGGAAACTGCGGATCAGATGATGATGCAGCAGATGTACAGTATTGCGCGATCTGCCGGGAAAAACCCGCCACCTGAAGCGAAAAGCAATAAATAAGTAAAAAAATGCCCGGCGTCGCCGGGCATTTACGTTAATTATGACTCTTT