Orthogroup:group_310


Homologs in group_310

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09025 FBDBKF_09025 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10385 EHELCC_10385 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10730 NLDBIP_10730 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_10625 LHKJJB_10625 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13685 HKOGLL_13685 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10945 F4V73_RS10945 Morganella psychrotolerans - fimbrial protein
PMI_RS01245 PMI_RS01245 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01295 PMI_RS01295 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_310 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_310 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_310

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_310.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimA 5
2 - 3

Product

# Product Occurence
1 Pilin (type 1 fimbrial protein) 5
2 fimbrial protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 8 N Cell motility (N) Pilin (type 1 fimbrial protein)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 8 Fimbrial protein

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042625 6 fimbrial protein VF1233 Adherence

Annotations of the 4 SwissProt hits

Annotation Number of occurrences
Fimbrial adapter PapF 1
Minor fimbrial protein PrsF 1
Uncharacterized fimbrial-like protein YfcQ 1
Uncharacterized fimbrial-like protein YfcR 1

Protein length

Min length 178
Max length 184
Mean length (sd) 179.2 (2.2)
Median length 178.0

Protein length distribution