Homologs in group_1704

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11880 FBDBKF_11880 76.3 Morganella morganii S1 polA DNA polymerase I
EHELCC_14425 EHELCC_14425 76.3 Morganella morganii S2 polA DNA polymerase I
NLDBIP_15520 NLDBIP_15520 76.3 Morganella morganii S4 polA DNA polymerase I
LHKJJB_15090 LHKJJB_15090 76.3 Morganella morganii S3 polA DNA polymerase I
HKOGLL_14210 HKOGLL_14210 76.3 Morganella morganii S5 polA DNA polymerase I
F4V73_RS14775 F4V73_RS14775 75.7 Morganella psychrotolerans polA DNA polymerase I

Distribution of the homologs in the orthogroup group_1704

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1704

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00582 0.0 1331 70 3 937 1 polA DNA polymerase I Escherichia coli (strain K12)
Q9F173 0.0 1319 70 3 934 3 polA DNA polymerase I Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P43741 0.0 1253 65 4 934 3 polA DNA polymerase I Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9HT80 0.0 1108 60 6 933 3 polA DNA polymerase I Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9S1G2 0.0 736 42 16 1001 3 polA DNA polymerase I Rhizobium leguminosarum
O08307 0.0 610 39 16 950 3 polA DNA polymerase I Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
P74933 0.0 592 35 16 1003 3 polA DNA polymerase I Treponema pallidum (strain Nichols)
Q55971 0.0 575 37 20 1004 3 polA DNA polymerase I Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q04957 0.0 574 37 16 942 1 polA DNA polymerase I Bacillus caldotenax
P52026 0.0 567 37 14 931 1 polA DNA polymerase I Geobacillus stearothermophilus
O51498 0.0 560 36 16 933 3 polA DNA polymerase I Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q9CDS1 3.3e-176 536 37 21 950 3 polA DNA polymerase I Lactococcus lactis subsp. lactis (strain IL1403)
P59200 1.12e-167 514 36 20 935 3 polA DNA polymerase I Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P59199 5.15e-167 513 36 20 935 3 polA DNA polymerase I Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P46835 1.03e-160 497 35 22 951 3 polA DNA polymerase I Mycobacterium leprae (strain TN)
Q9ZJE9 4.93e-126 406 33 29 940 3 polA DNA polymerase I Helicobacter pylori (strain J99 / ATCC 700824)
P56105 8.17e-125 402 33 31 947 3 polA DNA polymerase I Helicobacter pylori (strain ATCC 700392 / 26695)
O34996 2.32e-124 401 43 5 499 3 polA DNA polymerase I Bacillus subtilis (strain 168)
O34996 1.99e-52 201 40 3 287 3 polA DNA polymerase I Bacillus subtilis (strain 168)
O52225 1.07e-120 390 47 3 432 3 polA DNA polymerase I, thermostable Thermus filiformis
O52225 4.76e-52 200 40 5 307 3 polA DNA polymerase I, thermostable Thermus filiformis
P52028 5.9e-119 385 44 3 461 3 polA DNA polymerase I, thermostable Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P52028 3.9e-50 194 40 3 275 3 polA DNA polymerase I, thermostable Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P80194 4.44e-118 383 44 3 461 1 polA DNA polymerase I, thermostable Thermus caldophilus
P80194 2e-48 189 39 3 275 1 polA DNA polymerase I, thermostable Thermus caldophilus
O32801 7.13e-118 384 42 7 516 3 polA DNA polymerase I Lactococcus lactis subsp. cremoris (strain MG1363)
O32801 5.48e-48 188 36 8 344 3 polA DNA polymerase I Lactococcus lactis subsp. cremoris (strain MG1363)
P19821 3.17e-117 381 44 3 461 1 polA DNA polymerase I, thermostable Thermus aquaticus
P19821 7.74e-48 187 39 5 276 1 polA DNA polymerase I, thermostable Thermus aquaticus
Q9RAA9 6.62e-116 380 47 4 407 3 polA DNA polymerase I Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q9RAA9 1.02e-60 226 39 1 288 3 polA DNA polymerase I Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92GB7 5.08e-114 373 46 6 426 3 polA DNA polymerase I Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q92GB7 1.12e-61 229 39 1 288 3 polA DNA polymerase I Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q59156 5.66e-114 372 41 5 491 3 polA DNA polymerase I Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / KCTC 15123 / Z-1320)
Q59156 2.76e-59 221 42 3 289 3 polA DNA polymerase I Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / KCTC 15123 / Z-1320)
P30313 2.66e-113 370 44 3 461 3 polA DNA polymerase I, thermostable Thermus thermophilus
P30313 3.76e-46 182 38 7 301 3 polA DNA polymerase I, thermostable Thermus thermophilus
P52027 5.85e-111 367 46 3 406 3 polA DNA polymerase I Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P52027 7.03e-47 185 43 4 254 3 polA DNA polymerase I Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q1RH76 1.85e-110 363 45 4 408 3 polA DNA polymerase I Rickettsia bellii (strain RML369-C)
Q1RH76 1.35e-60 226 38 1 288 3 polA DNA polymerase I Rickettsia bellii (strain RML369-C)
Q9RLB6 7.47e-110 363 46 4 407 3 polA DNA polymerase I Rickettsia helvetica
Q9RLB6 1.97e-61 229 40 1 280 3 polA DNA polymerase I Rickettsia helvetica
Q9RLA0 1.03e-108 359 40 9 524 3 polA DNA polymerase I Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q9RLA0 2.31e-57 216 37 2 288 3 polA DNA polymerase I Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P9WNU5 2.2e-108 359 39 9 506 1 polA DNA polymerase I Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNU5 5.58e-44 176 36 4 287 1 polA DNA polymerase I Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNU4 2.2e-108 359 39 9 506 3 polA DNA polymerase I Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WNU4 5.58e-44 176 36 4 287 3 polA DNA polymerase I Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A551 2.2e-108 359 39 9 506 3 polA DNA polymerase I Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P0A551 5.58e-44 176 36 4 287 3 polA DNA polymerase I Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
O05949 5.89e-107 354 40 9 524 3 polA DNA polymerase I Rickettsia prowazekii (strain Madrid E)
O05949 1.53e-56 214 38 2 288 3 polA DNA polymerase I Rickettsia prowazekii (strain Madrid E)
Q89AD1 1.49e-79 263 48 0 289 3 pol 5'-3' exonuclease Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8K9D0 1.45e-75 252 43 1 285 3 pol 5'-3' exonuclease Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57506 2.1e-75 251 43 1 283 3 BU431 5'-3' exonuclease Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q7TQ07 1.19e-68 249 31 13 524 2 Poln DNA polymerase nu Mus musculus
Q7Z5Q5 1.76e-67 246 33 8 435 1 POLN DNA polymerase nu Homo sapiens
O67550 7.2e-64 220 41 2 281 3 aq_1628 5'-3' exonuclease Aquifex aeolicus (strain VF5)
Q588V7 2.26e-62 234 34 7 437 2 TEB Helicase and polymerase-containing protein TEBICHI Arabidopsis thaliana
P30314 8.46e-61 227 27 15 635 3 31 DNA polymerase Bacillus phage SP01
O18475 1.56e-57 219 31 12 480 1 PolQ DNA polymerase theta Drosophila melanogaster
Q8CGS6 8.11e-56 214 27 13 610 1 Polq DNA polymerase theta Mus musculus
O67779 6.44e-55 204 30 24 637 3 polA DNA polymerase I Aquifex aeolicus (strain VF5)
P19822 2.21e-51 198 27 15 617 1 T5.122 DNA polymerase Escherichia phage T5
O75417 1.67e-46 185 26 14 609 1 POLQ DNA polymerase theta Homo sapiens
Q84ND9 4.63e-42 170 34 8 323 2 POLIB DNA polymerase I B, chloroplastic/mitochondrial Arabidopsis thaliana
Q84ND9 3.73e-09 64 25 10 263 2 POLIB DNA polymerase I B, chloroplastic/mitochondrial Arabidopsis thaliana
A0FLQ6 7.45e-41 167 27 13 447 1 polq-1 DNA polymerase theta Caenorhabditis elegans
F4I6M1 2.56e-40 165 34 8 323 2 POLIA DNA polymerase I A, chloroplastic/mitochondrial Arabidopsis thaliana
F4I6M1 1.68e-07 59 26 11 246 2 POLIA DNA polymerase I A, chloroplastic/mitochondrial Arabidopsis thaliana
A8FYJ2 8.03e-40 151 36 5 265 3 xni Flap endonuclease Xni Shewanella sediminis (strain HAW-EB3)
Q9PQ75 1.79e-39 151 33 6 297 3 polA 5'-3' exonuclease Ureaplasma parvum serovar 3 (strain ATCC 700970)
A3QGM4 5.78e-39 149 34 7 263 3 xni Flap endonuclease Xni Shewanella loihica (strain ATCC BAA-1088 / PV-4)
P0DTK4 7.45e-39 158 26 25 625 1 gp62 DNA-directed DNA polymerase Pseudomonas phage M6
B0TPG7 1.23e-38 147 37 7 254 3 xni Flap endonuclease Xni Shewanella halifaxensis (strain HAW-EB4)
A7MR03 3.99e-38 146 35 3 226 3 xni Flap endonuclease Xni Cronobacter sakazakii (strain ATCC BAA-894)
Q0HSY6 1.1e-37 145 35 7 266 3 xni Flap endonuclease Xni Shewanella sp. (strain MR-7)
Q0HGN0 1.1e-37 145 35 7 266 3 xni Flap endonuclease Xni Shewanella sp. (strain MR-4)
A8GIF8 4.22e-37 143 32 6 259 3 xni Flap endonuclease Xni Serratia proteamaculans (strain 568)
Q6Z4T3 5.24e-37 154 32 5 308 3 Os08g0175600 DNA polymerase I B, mitochondrial Oryza sativa subsp. japonica
Q6Z4T3 0.000111 50 22 8 235 3 Os08g0175600 DNA polymerase I B, mitochondrial Oryza sativa subsp. japonica
Q8EGP9 8.34e-37 142 34 5 265 3 xni Flap endonuclease Xni Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
B1KQX1 1.41e-36 142 35 7 254 3 xni Flap endonuclease Xni Shewanella woodyi (strain ATCC 51908 / MS32)
A1S8B8 1.58e-36 141 32 4 262 3 xni Flap endonuclease Xni Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
A1JP96 2.1e-36 141 33 5 262 3 xni Flap endonuclease Xni Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A0A2H5BHJ5 3.09e-36 149 26 22 627 1 dpoZ DNA polymerase DpoZ Acinetobacter phage SH-Ab 15497
B8CS65 3.82e-36 140 33 5 265 3 xni Flap endonuclease Xni Shewanella piezotolerans (strain WP3 / JCM 13877)
Q7N8Q9 4.15e-36 140 32 5 259 3 xni Flap endonuclease Xni Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
P54161 8.6e-36 141 31 6 287 1 ypcP 5'-3' exonuclease Bacillus subtilis (strain 168)
Q6Z4T5 1.46e-35 149 31 5 308 2 Os08g0175300 DNA polymerase I A, chloroplastic Oryza sativa subsp. japonica
Q6Z4T5 8.17e-05 50 23 8 237 2 Os08g0175300 DNA polymerase I A, chloroplastic Oryza sativa subsp. japonica
A3D2C6 1.51e-35 139 33 7 266 3 xni Flap endonuclease Xni Shewanella baltica (strain OS155 / ATCC BAA-1091)
A8H6V6 1.82e-35 139 34 7 266 3 xni Flap endonuclease Xni Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
A6WL18 2.14e-35 139 33 6 262 3 xni Flap endonuclease Xni Shewanella baltica (strain OS185)
A1RLT6 2.51e-35 138 32 7 274 3 xni Flap endonuclease Xni Shewanella sp. (strain W3-18-1)
A4Y4Y4 2.51e-35 138 32 7 274 3 xni Flap endonuclease Xni Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Q6D8F6 3.68e-35 138 32 5 259 3 xni Flap endonuclease Xni Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P9WNU2 6.21e-35 139 30 8 315 3 MT2151 5'-3' exonuclease Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A4TLA4 6.88e-35 137 33 5 259 3 xni Flap endonuclease Xni Yersinia pestis (strain Pestoides F)
Q1CFD3 6.88e-35 137 33 5 259 3 xni Flap endonuclease Xni Yersinia pestis bv. Antiqua (strain Nepal516)
Q7CH07 6.88e-35 137 33 5 259 3 xni Flap endonuclease Xni Yersinia pestis
B7LVW5 8.83e-35 136 34 2 222 3 xni Flap endonuclease Xni Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B8EAT2 9.09e-35 137 33 7 266 3 xni Flap endonuclease Xni Shewanella baltica (strain OS223)
A9KTM9 9.36e-35 137 33 6 262 3 xni Flap endonuclease Xni Shewanella baltica (strain OS195)
A0A2L0V166 1.08e-34 144 26 25 637 3 dpoZ DNA polymerase DpoZ Salmonella phage PMBT28
Q07ZE8 1.13e-34 136 31 5 262 3 xni Flap endonuclease Xni Shewanella frigidimarina (strain NCIMB 400)
B1JQE9 1.21e-34 136 33 5 259 3 xni Flap endonuclease Xni Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q667H8 1.21e-34 136 33 5 259 3 xni Flap endonuclease Xni Yersinia pseudotuberculosis serotype I (strain IP32953)
B2JZ46 1.21e-34 136 33 5 259 3 xni Flap endonuclease Xni Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FFF8 1.21e-34 136 33 5 259 3 xni Flap endonuclease Xni Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A0KZ94 1.23e-34 136 33 6 265 3 xni Flap endonuclease Xni Shewanella sp. (strain ANA-3)
C6DAH2 1.61e-34 136 33 5 259 3 xni Flap endonuclease Xni Pectobacterium carotovorum subsp. carotovorum (strain PC1)
P9WNU3 1.74e-34 137 30 8 315 1 Rv2090 5'-3' exonuclease Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P75403 6.41e-34 135 33 12 298 3 polA 5'-3' exonuclease Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
C5BHA5 1.37e-33 133 33 5 262 3 xni Flap endonuclease Xni Edwardsiella ictaluri (strain 93-146)
Q83JW7 1.67e-33 133 32 2 224 3 xni Flap endonuclease Xni Shigella flexneri
Q0T161 1.67e-33 133 32 2 224 3 xni Flap endonuclease Xni Shigella flexneri serotype 5b (strain 8401)
Q3YY58 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Shigella sonnei (strain Ss046)
Q32CC0 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Shigella dysenteriae serotype 1 (strain Sd197)
Q31XJ2 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Shigella boydii serotype 4 (strain Sb227)
B2TZD5 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6I6J6 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli (strain SE11)
P38506 2.02e-33 132 32 2 224 1 ygdG Flap endonuclease Xni Escherichia coli (strain K12)
A8A3T3 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O9:H4 (strain HS)
B1XDK7 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli (strain K12 / DH10B)
C4ZZV3 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli (strain K12 / MC4100 / BW2952)
B7LXL4 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O8 (strain IAI1)
Q8X6R9 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O157:H7
B7LEX6 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli (strain 55989 / EAEC)
A7ZQP2 2.02e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O139:H28 (strain E24377A / ETEC)
Q0TE61 2.45e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N732 2.5e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7MZ94 3.46e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O81 (strain ED1a)
Q1R7P3 3.53e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli (strain UTI89 / UPEC)
Q8FEF2 3.53e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1AEY5 3.53e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O1:K1 / APEC
B7MLB9 3.53e-33 132 32 2 224 3 xni Flap endonuclease Xni Escherichia coli O45:K1 (strain S88 / ExPEC)
A8AP08 8.28e-33 130 30 5 259 3 xni Flap endonuclease Xni Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B7UHL4 8.44e-33 130 31 2 224 3 xni Flap endonuclease Xni Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A0KHE3 1.9e-32 130 36 3 220 3 xni Flap endonuclease Xni Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
C0PXF9 2.31e-32 129 33 2 224 3 xni Flap endonuclease Xni Salmonella paratyphi C (strain RKS4594)
Q57KE5 2.31e-32 129 33 2 224 3 xni Flap endonuclease Xni Salmonella choleraesuis (strain SC-B67)
Q12L39 2.61e-32 129 31 4 253 3 xni Flap endonuclease Xni Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
B7NVU6 5.75e-32 128 31 2 224 3 xni Flap endonuclease Xni Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q8Z433 7.03e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella typhi
Q9KAV6 7.11e-32 130 31 7 286 3 BH2180 5'-3' exonuclease Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
B5RDV0 7.45e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QWQ6 7.45e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella enteritidis PT4 (strain P125109)
B5FTX5 7.45e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella dublin (strain CT_02021853)
G3FFN8 7.98e-32 136 25 25 647 1 dpoZ DNA polymerase DpoZ Vibrio phage phiVC8
Q8ZMC9 8.2e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A9N2I4 8.2e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5F4R7 8.2e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella agona (strain SL483)
B4TGM7 8.68e-32 128 32 2 224 3 xni Flap endonuclease Xni Salmonella heidelberg (strain SL476)
B5BF27 1.02e-31 127 32 2 224 3 xni Flap endonuclease Xni Salmonella paratyphi A (strain AKU_12601)
Q5PEL3 1.02e-31 127 32 2 224 3 xni Flap endonuclease Xni Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TUJ1 1.15e-31 127 32 2 224 3 xni Flap endonuclease Xni Salmonella schwarzengrund (strain CVM19633)
A4SQK3 1.94e-31 127 35 1 217 3 xni Flap endonuclease Xni Aeromonas salmonicida (strain A449)
A1SYB8 4.82e-31 126 33 1 222 3 xni Flap endonuclease Xni Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37)
Q6LN06 6.91e-31 125 33 6 267 3 xni Flap endonuclease Xni Photobacterium profundum (strain SS9)
B4T4W5 7.36e-31 125 32 2 224 3 xni Flap endonuclease Xni Salmonella newport (strain SL254)
Q1CAP8 1.84e-30 123 34 4 221 3 xni Flap endonuclease Xni Yersinia pestis bv. Antiqua (strain Antiqua)
A6TD79 2.74e-30 124 30 2 226 3 xni Flap endonuclease Xni Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XUZ0 2.74e-30 124 30 2 226 3 xni Flap endonuclease Xni Klebsiella pneumoniae (strain 342)
O64235 8.42e-30 129 25 14 457 3 44 DNA polymerase Mycobacterium phage D29
Q8DFB4 1.83e-29 121 30 5 262 3 xni Flap endonuclease Xni Vibrio vulnificus (strain CMCP6)
Q87RT0 2.78e-29 121 32 4 220 3 xni Flap endonuclease Xni Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q7MN34 2.87e-29 121 30 5 262 3 xni Flap endonuclease Xni Vibrio vulnificus (strain YJ016)
Q9KTK4 2.87e-29 121 32 3 230 3 xni Flap endonuclease Xni Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q98PK2 3.82e-29 121 29 6 295 3 polA 5'-3' exonuclease Mycoplasmopsis pulmonis (strain UAB CTIP)
Q05254 8.55e-29 126 25 19 525 3 44 DNA polymerase Mycobacterium phage L5
Q47YA8 1e-28 120 32 1 224 3 xni Flap endonuclease Xni Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
A7MYB8 1.95e-28 118 32 3 220 3 xni Flap endonuclease Xni Vibrio campbellii (strain ATCC BAA-1116)
Q49406 1.78e-27 116 32 5 270 3 polA 5'-3' exonuclease Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q2NRJ8 2.98e-27 115 32 4 223 3 xni Flap endonuclease Xni Sodalis glossinidius (strain morsitans)
B5FAT7 1.06e-26 113 28 3 259 3 xni Flap endonuclease Xni Aliivibrio fischeri (strain MJ11)
Q5E7A7 1.13e-26 113 28 3 259 3 xni Flap endonuclease Xni Aliivibrio fischeri (strain ATCC 700601 / ES114)
A9R2J1 4.08e-26 110 38 1 163 3 xni Flap endonuclease Xni Yersinia pestis bv. Antiqua (strain Angola)
B7VJ90 7.76e-26 111 30 2 222 3 xni Flap endonuclease Xni Vibrio atlanticus (strain LGP32)
B6EGG3 7.84e-26 110 27 3 264 3 xni Flap endonuclease Xni Aliivibrio salmonicida (strain LFI1238)
Q3ICC5 1.23e-25 110 29 3 227 3 xni Flap endonuclease Xni Pseudoalteromonas translucida (strain TAC 125)
Q9RJ79 2.61e-25 110 33 6 229 3 SCO1622 5'-3' exonuclease Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
C4L9Z0 2.96e-25 109 32 3 226 3 xni Flap endonuclease Xni Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
P20311 1.43e-13 78 24 13 392 3 5 DNA-directed DNA polymerase Enterobacteria phage T3
P00581 5.69e-13 76 25 15 394 1 5 DNA-directed DNA polymerase Escherichia phage T7
P06229 1.58e-11 69 26 5 221 1 D15 Flap endonuclease Escherichia phage T5
P06225 1.08e-05 53 20 5 247 3 L DNA polymerase Bacillus phage SP02
Q9T1Q3 3.55e-05 51 33 2 90 3 45 Probable DNA polymerase Acyrthosiphon pisum secondary endosymbiont phage 1
Q54NU0 0.00037 47 25 8 241 3 repG Flap endonuclease 1 Dictyostelium discoideum
A4HFE4 0.000436 47 24 12 250 3 FEN1 Flap endonuclease 1 Leishmania braziliensis
Q4UFP0 0.000634 47 24 9 240 3 FEN1 Flap endonuclease 1 Theileria annulata

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13960
Feature type CDS
Gene polA
Product DNA polymerase I
Location 3099477 - 3102275 (strand: -1)
Length 2799 (nucleotides) / 932 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1704
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00476 DNA polymerase family A
PF01367 5'-3' exonuclease, C-terminal SAM fold
PF01612 3'-5' exonuclease
PF02739 5'-3' exonuclease, N-terminal resolvase-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0749 Replication, recombination and repair (L) L DNA polymerase I, 3'-5' exonuclease and polymerase domains

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02335 DNA polymerase I [EC:2.7.7.7] DNA replication
Base excision repair
Nucleotide excision repair
Homologous recombination		 -

Protein Sequence

MVQIAENPFILVDGSSYLYRAYHAFPPLTNSKGEPTGAMYGVLNMLRSLIIQYKPSHVAVVFDAKGKTFRDELYEEYKSNRPPMPDDLREQIEPLHEMVQAMGLPLLSITGVEADDVIGTLALKAASDGRNVLISTGDKDMAQLVTPNITLINTMTNVILGPDEVKEKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTALGLLQGLGSLEDIYQQLDKIATLSFRGAKTLGAKMVEHEKVAKLSYQLATIKTDVALDKTFDDLVVNEPNLDKLLEMFTRYEFKRWISDLQNGGWLAQRSSRKAPVPYSAEVATPKEQPAADNFPVISQENYESILTHESLMRWVEVLKKAPAFAFDTETDSLNNIDARLIGLSFAVEPGKAAYIPLRHDYLDAPEQLPVDEVLTALKPILEDKTILKIGQNLKFDRGIMENEGIELNGIYFDTMLESYVLNSVSSRHDMDTLAEKHLNHKTTTFEEIAGKGKGQLTFNQIEVEQATLYAAEDADITLLLHQALYPQIEAIAPLKHVYHDIEMPLVPVLSRMERKGVLIDAQVLAMQSQEITQRLAEIEKETFALAGQEFNLSSPKQLQEILFEKLNLPIIKKTPKGAPSTNEEVLEALAHSHELPRLILEHRGLAKLKSTYTDKLPLMVNSKTKRVHTSYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIARDGFKIVAADYSQIELRIMAHLSQDKGLLDAFAQGKDIHRATASEVFGIPLDEVTSEQRRSAKAINFGLIYGMSAFGLSQQIGVERKEAQRYMDLYFERYPGVLDYMERTRKQASQQGYVETLDGRRLYLPEINSKNAIRRKASEREAINAPMQGTAADIIKKAMIAVDNWICHECPDDVHMIMQVHDELVFEVRESYLEKANAMIHKLMESSMELAIPLKVEVGVGNNWDEAH

Flanking regions ( +/- flanking 50bp)

TGTGGCATTCTAGTCATATCAATGAACCTCAGAACAATGATGAACAGATTATGGTCCAGATAGCAGAAAACCCCTTTATCCTTGTAGATGGCTCTTCATACCTTTATCGTGCCTATCATGCTTTTCCTCCGCTAACTAATAGCAAAGGTGAACCCACAGGGGCGATGTATGGTGTGTTAAACATGCTACGCAGCCTAATAATTCAGTATAAGCCTAGTCATGTGGCGGTTGTGTTTGATGCTAAAGGCAAAACATTCCGTGATGAGTTGTATGAGGAATATAAATCTAATCGCCCACCAATGCCAGATGATCTGCGTGAGCAGATTGAGCCTTTGCATGAAATGGTTCAAGCGATGGGCTTACCGTTACTTTCTATTACTGGCGTTGAAGCTGATGATGTGATTGGCACATTGGCATTAAAAGCAGCCAGTGATGGTCGTAATGTGTTAATCAGTACCGGTGATAAAGATATGGCACAGCTAGTTACGCCCAATATCACACTTATCAACACGATGACGAATGTTATTTTAGGCCCCGATGAAGTTAAAGAAAAATATGGGGTGCCACCGGAGTTGATTATCGACTTTCTCGCCCTGATGGGTGACTCATCAGATAATATTCCCGGTGTTCCGGGCGTAGGTGAAAAAACAGCATTAGGGCTATTGCAAGGACTTGGTAGCTTAGAGGATATTTATCAACAGCTTGATAAAATAGCCACATTGAGTTTCCGAGGTGCGAAAACACTTGGCGCTAAAATGGTTGAACATGAGAAAGTTGCCAAACTTTCTTATCAATTAGCGACAATTAAAACAGATGTAGCGCTTGATAAAACCTTTGATGACTTAGTGGTTAATGAACCTAATTTAGATAAGTTACTTGAAATGTTTACGCGTTATGAATTTAAACGCTGGATAAGTGACTTACAAAATGGTGGTTGGTTAGCTCAACGCAGTAGCCGTAAAGCGCCAGTCCCCTATAGTGCAGAAGTCGCAACACCCAAAGAGCAGCCAGCTGCAGACAATTTCCCAGTTATCTCTCAAGAGAACTATGAGTCTATATTGACTCATGAAAGCTTAATGCGCTGGGTTGAGGTACTGAAAAAAGCGCCCGCCTTTGCTTTTGATACTGAAACAGATAGCTTGAATAATATTGATGCACGTTTAATCGGTCTGTCATTTGCGGTAGAGCCTGGCAAGGCCGCTTATATTCCATTGCGTCATGATTATCTAGATGCACCAGAGCAATTACCTGTTGATGAGGTACTAACTGCTTTAAAACCGATTTTAGAAGATAAAACCATCTTAAAAATTGGGCAAAACCTGAAATTCGACCGCGGCATTATGGAAAATGAAGGCATCGAATTAAACGGTATTTATTTTGATACCATGTTGGAGTCTTATGTCTTAAATAGTGTGAGTAGCCGCCATGATATGGATACCTTAGCGGAAAAGCATTTAAATCATAAAACGACGACATTTGAAGAGATTGCTGGTAAAGGTAAGGGGCAACTTACCTTTAATCAGATTGAGGTTGAACAAGCGACCTTATATGCAGCGGAAGATGCTGATATTACCTTGTTACTGCATCAAGCGCTTTATCCTCAAATAGAGGCGATTGCACCGCTAAAACACGTTTATCACGATATTGAGATGCCATTAGTCCCTGTGCTTTCACGCATGGAGCGTAAGGGCGTATTGATTGACGCACAAGTGCTTGCCATGCAATCCCAAGAAATCACTCAACGTTTAGCTGAGATTGAAAAAGAGACATTCGCGTTAGCAGGGCAAGAATTTAATCTCTCTTCACCTAAGCAATTACAAGAGATTTTATTTGAAAAACTCAATCTTCCTATTATCAAGAAAACGCCAAAAGGTGCCCCTTCAACAAATGAAGAAGTGTTAGAAGCGTTAGCGCATAGTCATGAGTTACCTCGTTTAATTTTAGAACATCGTGGATTGGCAAAATTAAAATCGACTTATACGGATAAATTGCCGTTGATGGTCAATAGTAAAACTAAGCGGGTGCATACTTCATATCATCAGGCGGTGACTGCGACAGGACGTTTATCTTCTCGTGATCCTAATCTGCAAAATATTCCAGTAAGAAATGAAGAGGGGCGTCGTATTCGCCAAGCGTTTATTGCCCGTGATGGTTTTAAAATAGTTGCTGCCGACTATTCTCAAATCGAATTACGTATTATGGCGCATTTATCGCAAGATAAAGGTTTGCTTGATGCTTTTGCTCAAGGGAAAGATATTCACCGAGCTACTGCATCTGAAGTGTTTGGTATACCTTTAGACGAAGTCACCTCTGAACAACGTCGTAGTGCGAAAGCGATCAACTTTGGTCTTATTTATGGTATGAGCGCATTTGGTTTATCACAGCAGATTGGTGTTGAACGAAAAGAAGCACAGCGATATATGGATCTCTATTTTGAACGTTATCCAGGGGTATTAGATTATATGGAGCGTACCCGTAAACAAGCGTCACAGCAAGGCTATGTGGAAACGTTAGATGGACGCCGTTTATATCTGCCAGAGATTAACTCTAAAAATGCGATCCGACGTAAAGCATCAGAGCGTGAAGCGATTAACGCACCTATGCAGGGAACGGCAGCCGATATCATTAAAAAAGCAATGATTGCGGTGGATAATTGGATCTGTCATGAATGCCCTGATGATGTACATATGATTATGCAGGTACACGATGAATTAGTGTTTGAGGTACGAGAGTCATATTTAGAAAAAGCAAATGCGATGATCCATAAGCTCATGGAAAGTAGCATGGAGCTTGCTATTCCACTGAAAGTCGAAGTCGGAGTCGGTAATAACTGGGATGAAGCCCATTAATGACGAGATAACACTTTGTTTATAATAGATATCAGAATGGTTTTTTAACT