Orthogroup:group_3070



Homologs in group_3070

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18780 FBDBKF_18780 Morganella morganii S1 rhtB Threonine/homoserine/homoserine lactone efflux protein
EHELCC_16975 EHELCC_16975 Morganella morganii S2 rhtB Threonine/homoserine/homoserine lactone efflux protein
NLDBIP_18355 NLDBIP_18355 Morganella morganii S4 rhtB Threonine/homoserine/homoserine lactone efflux protein
LHKJJB_09270 LHKJJB_09270 Morganella morganii S3 rhtB Threonine/homoserine/homoserine lactone efflux protein
HKOGLL_08820 HKOGLL_08820 Morganella morganii S5 rhtB Threonine/homoserine/homoserine lactone efflux protein
F4V73_RS13815 F4V73_RS13815 Morganella psychrotolerans - LysE family transporter

Distribution of group_3070 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3070 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3070

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3070.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhtB 5
2 - 1

Product

# Product Occurence
1 Threonine/homoserine/homoserine lactone efflux protein 5
2 LysE family transporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1280 6 E Amino acid transport and metabolism (E) Threonine/homoserine/homoserine lactone efflux protein

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01810 6 LysE type translocator

Annotations of the 31 SwissProt hits

Annotation Number of occurrences
Homoserine/homoserine lactone efflux protein 4
Leucine efflux protein 17
Putative leucine efflux protein 1
Threonine efflux protein 4
Uncharacterized membrane protein HI_1307 1
Uncharacterized membrane protein PA4757 1
Uncharacterized membrane protein VC_0136 1
Uncharacterized membrane protein YahN 1
Uncharacterized membrane protein YrhP 1

Protein length

Unique protein length 216

Protein length distribution