Homologs in group_3067

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18545 FBDBKF_18545 52.2 Morganella morganii S1 - Enterohemolysin
EHELCC_01840 EHELCC_01840 52.2 Morganella morganii S2 - Enterohemolysin
NLDBIP_01620 NLDBIP_01620 52.2 Morganella morganii S4 - Enterohemolysin
LHKJJB_00415 LHKJJB_00415 52.2 Morganella morganii S3 - Enterohemolysin
HKOGLL_00455 HKOGLL_00455 52.2 Morganella morganii S5 - Enterohemolysin

Distribution of the homologs in the orthogroup group_3067

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3067

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06305
Feature type CDS
Gene -
Product RecT family recombinase
Location 1314325 - 1315188 (strand: 1)
Length 864 (nucleotides) / 287 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3067
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF03837 RecT family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06908 Bacteriophage tail tube protein - -

Protein Sequence

MSQEITTIDVDREADTSSAIFSPSGLQKLQAFAEVMSMGIATIPKHLAGNKADCLAIALQAAQWKMNPYAVAQKTHLVNGVLGYEAQLVNAVVTSSKAVTSRFHYRYGGDWTRITGTKNKSDETGLYVEVGAILRGDTEITWGEPLYMLDITTRNSPLWKTVPKQQIAYLAVKYWARLYCPEVILGVYTPDEFDSEPRAVRDITPRATKQDLNNLINNKPVEEKPSDDRSPDQILCDFTEAAGSAKSIDELEKFYKYSAKKLADNAELLDKATDIYQIRKDEIAPVE

Flanking regions ( +/- flanking 50bp)

CGGCATAGAACCAATATCGCGCCCCGAGTGGGCAAGAAGGAAAAATTAATATGTCACAGGAAATAACGACAATTGATGTCGATCGCGAAGCTGACACATCGAGCGCAATCTTCAGTCCATCAGGGCTGCAAAAGTTACAGGCATTTGCAGAAGTAATGTCGATGGGTATCGCAACGATTCCGAAGCATCTGGCGGGGAATAAAGCTGACTGTCTCGCCATTGCTCTACAAGCGGCGCAGTGGAAGATGAATCCCTACGCGGTCGCTCAAAAAACACACCTGGTAAATGGTGTTTTGGGCTATGAGGCGCAGTTGGTTAATGCCGTTGTGACCAGCTCAAAAGCTGTTACCAGTCGTTTTCATTACCGGTACGGTGGCGATTGGACACGCATTACCGGCACGAAAAACAAATCAGATGAAACCGGTCTGTATGTTGAGGTTGGTGCAATTTTGCGCGGTGATACGGAAATCACCTGGGGCGAACCACTCTATATGCTCGACATTACCACCAGAAACTCCCCGCTTTGGAAAACAGTACCAAAGCAGCAGATCGCTTACCTTGCGGTGAAATATTGGGCGCGACTCTACTGCCCCGAGGTCATCTTGGGAGTTTACACGCCTGACGAATTTGATTCAGAGCCACGGGCAGTGCGGGACATAACACCAAGAGCCACAAAACAAGACCTCAATAATCTGATTAACAATAAACCTGTCGAAGAGAAACCATCTGACGACCGCTCACCAGATCAGATTTTATGTGACTTTACGGAAGCGGCCGGCAGCGCGAAAAGTATCGACGAACTCGAAAAGTTCTACAAATACAGTGCTAAAAAATTAGCAGATAACGCGGAGCTGCTGGATAAGGCAACTGATATTTACCAAATCCGCAAAGACGAAATAGCGCCCGTCGAATAACCCCACCGTTTCAGGATGAAGCTTAATGCAGGGATGCTGAGGAAATAACA