Orthogroup:group_3043


Homologs in group_3043

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18160 FBDBKF_18160 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_16860 EHELCC_16860 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_17590 NLDBIP_17590 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_17510 LHKJJB_17510 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_17325 HKOGLL_17325 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10365 F4V73_RS10365 Morganella psychrotolerans - fimbrial protein

Distribution of group_3043 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3043 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3043

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3043.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimA 5
2 - 1

Product

# Product Occurence
1 Pilin (type 1 fimbrial protein) 5
2 fimbrial protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 6 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 6 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 6 Fimbrial protein

Annotations of the 26 SwissProt hits

Annotation Number of occurrences
F7-2 fimbrial protein 2
Fimbria A protein 1
Fimbrial protein 987P 1
Fimbrial subunit type 1 3
Fimbrin-like protein FimI 1
KS71A fimbrillin 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 1
PRS fimbrial major pilin protein (Fragment) 1
Pap fimbrial major pilin protein 1
Probable fimbrial subunit LpfE 1
Probable major fimbrial subunit LpfA 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial protein subunit SfaA 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein YbgD 1
Uncharacterized fimbrial-like protein YgiL 1

Protein length

Min length 196
Max length 198
Mean length (sd) 196.3 (0.8)
Median length 196.0

Protein length distribution