Orthogroup:group_3039


Homologs in group_3039

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18135 FBDBKF_18135 Morganella morganii S1 - Pilin (Type 1 fimbria component protein)
EHELCC_16835 EHELCC_16835 Morganella morganii S2 - Pilin (Type 1 fimbria component protein)
NLDBIP_17615 NLDBIP_17615 Morganella morganii S4 - Pilin (Type 1 fimbria component protein)
LHKJJB_17535 LHKJJB_17535 Morganella morganii S3 - Pilin (Type 1 fimbria component protein)
HKOGLL_17350 HKOGLL_17350 Morganella morganii S5 - Pilin (Type 1 fimbria component protein)
F4V73_RS10340 F4V73_RS10340 Morganella psychrotolerans - fimbrial protein

Distribution of group_3039 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3039 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3039

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3039.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 Pilin (Type 1 fimbria component protein) 5
2 fimbrial protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 6 N Cell motility (N) Pilin (type 1 fimbrial protein)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 6 Fimbrial protein

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Fimbria A protein 1
KS71A fimbrillin 1
Long polar fimbria protein A 1
Major fimbrial subunit 1
Probable major fimbrial subunit LpfA 1
Putative minor fimbrial subunit PmfF 1
Type-1 fimbrial protein, A chain 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YfcP 1

Protein length

Min length 180
Max length 182
Mean length (sd) 180.3 (0.8)
Median length 180.0

Protein length distribution