Orthogroup:group_3033


Homologs in group_3033

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18085 FBDBKF_18085 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_16785 EHELCC_16785 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_17665 NLDBIP_17665 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_17585 LHKJJB_17585 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_17400 HKOGLL_17400 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
F4V73_RS10290 F4V73_RS10290 Morganella psychrotolerans - EamA family transporter

Distribution of group_3033 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_3033 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3033

Orthogroup content: 6 members

Help

This page summarizes the annotation of all members of the orthologous group group_3033.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhaT 5
2 - 1

Product

# Product Occurence
1 Permease of the drug/metabolite transporter (DMT) superfamily 5
2 EamA family transporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0697 6 GER Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 Permease of the drug/metabolite transporter (DMT) superfamily

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00892 6 EamA-like transporter family

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
Probable cystine transporter YijE 2
Protein PecM 1
Riboflavin transporter 1
Uncharacterized transporter AF_0266 1
Uncharacterized transporter AF_0510 1
Uncharacterized transporter AF_1552 1
Uncharacterized transporter YdfC 1
Uncharacterized transporter YetK 1
Uncharacterized transporter YoaV 1
Uncharacterized transporter YvbV 1

Protein length

Min length 299
Max length 305
Mean length (sd) 300.0 (2.4)
Median length 299.0

Protein length distribution