Orthogroup:group_3007


Homologs in group_3007

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17660 FBDBKF_17660 Morganella morganii S1 - ABC-type uncharacterized transport system, permease component
EHELCC_18145 EHELCC_18145 Morganella morganii S2 - ABC-type uncharacterized transport system, permease component
NLDBIP_18005 NLDBIP_18005 Morganella morganii S4 - ABC-type uncharacterized transport system, permease component
LHKJJB_18200 LHKJJB_18200 Morganella morganii S3 - ABC-type uncharacterized transport system, permease component
HKOGLL_18000 HKOGLL_18000 Morganella morganii S5 - ABC-type uncharacterized transport system, permease component
F4V73_RS15040 F4V73_RS15040 Morganella psychrotolerans - ABC transporter permease subunit

Distribution of group_3007 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3007 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3007

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3007.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 ABC-type uncharacterized transport system, permease component 5
2 ABC transporter permease subunit 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4132 6 R General function prediction only (R) ABC-type uncharacterized transport system, permease component

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 6 Binding-protein-dependent transport system inner membrane component

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
Diacetylchitobiose uptake system permease protein NgcG 1
Ferric transport system permease protein FbpB 1
Probable ABC transporter permease protein y4fN 1
Probable molybdenum ABC transporter permease protein HVO_B0370 1
Probable sulfate transport system permease protein cysT 3
Putative ABC transporter permease protein ORF1 (Fragment) 1
Putative ferric transport system permease protein FbpB 1 1
Putrescine transport system permease protein PotH 1
Spermidine/putrescine transport system permease protein PotB 6
Sulfate transport system permease protein CysT 2
Thiamine transport system permease protein ThiP 4
sn-glycerol-3-phosphate transport system permease protein UgpA 12

Protein length

Min length 287
Max length 297
Mean length (sd) 295.3 (4.1)
Median length 297.0

Protein length distribution