COG1968


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1968, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Undecaprenyl pyrophosphate phosphatase
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG1968 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3000 FBDBKF_17500 34580 35401 -1 bacA undecaprenyl-diphosphate phosphatase Morganella morganii S1
1 group_3000 EHELCC_17395 34580 35401 -1 bacA undecaprenyl-diphosphate phosphatase Morganella morganii S2
2 group_3000 NLDBIP_17800 7395 8216 1 bacA undecaprenyl-diphosphate phosphatase Morganella morganii S4
3 group_3000 LHKJJB_17720 7393 8214 1 bacA undecaprenyl-diphosphate phosphatase Morganella morganii S3
4 group_3000 HKOGLL_17730 7393 8214 1 bacA undecaprenyl-diphosphate phosphatase Morganella morganii S5
5 group_3000 F4V73_RS16675 158500 159321 -1 bacA undecaprenyl-diphosphate phosphatase Morganella psychrotolerans