Orthogroup:group_2948


Homologs in group_2948

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15560 FBDBKF_15560 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_15920 EHELCC_15920 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_16450 NLDBIP_16450 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_16355 LHKJJB_16355 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family
HKOGLL_16125 HKOGLL_16125 Morganella morganii S5 potE Serine transporter YbeC, amino acid:H+ symporter family
F4V73_RS10860 F4V73_RS10860 Morganella psychrotolerans - APC family permease

Distribution of group_2948 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2948 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2948

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2948.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 potE 5
2 - 1

Product

# Product Occurence
1 Serine transporter YbeC, amino acid:H+ symporter family 5
2 APC family permease 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0531 6 E Amino acid transport and metabolism (E) Serine transporter YbeC, amino acid:H+ symporter family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13520 6 Amino acid permease

Annotations of the 78 SwissProt hits

Annotation Number of occurrences
Amino acid transporter protein 6 1
Arginine/agmatine antiporter 3
Asc-type amino acid transporter 1 2
Branched-chain amino acid permease BcaP 2
Cationic amino acid transporter 1 1
Cationic amino acid transporter 2 7
Cationic amino acid transporter 2, vacuolar 1
Cationic amino acid transporter 3 3
Cationic amino acid transporter 3, mitochondrial 1
Cationic amino acid transporter 4 2
Cationic amino acid transporter 4, vacuolar 1
Cationic amino acid transporter 5 1
Cationic amino acid transporter 6, chloroplastic 1
Cationic amino acid transporter 7, chloroplastic 1
Cationic amino acid transporter 8, vacuolar 1
Cationic amino acid transporter 9, chloroplastic 1
Cystine/glutamate transporter 3
High affinity cationic amino acid transporter 1 3
Histidine permease HisP 1
Inner membrane transport protein YbaT 1
L-asparagine permease 1
L-asparagine permease 1 1
L-methionine/branched-chain amino acid exporter YjeH 1
Large neutral amino acids transporter small subunit 2 5
Lysine-specific permease LysP 1
Methylthioribose transporter 1
Probable amino-acid permease meu22 1
Probable cationic amino acid transporter 1
Probable fructoselysine/psicoselysine transporter FrlA 2
Probable polyamine transporter At3g13620 1
Proline-specific permease ProY 4
Serine/threonine exchanger SteT 1
Uncharacterized amino acid permease YecA 1
Uncharacterized protein MJ0609 1
Uncharacterized transporter MT2031 1
Uncharacterized transporter MT2055 1
Uncharacterized transporter Mb2001c 1
Uncharacterized transporter Mb2022c 1
Uncharacterized transporter Rv1979c 1
Uncharacterized transporter Rv1999c 1
Y+L amino acid transporter 1 3
Y+L amino acid transporter 2 6
b(0,+)-type amino acid transporter 1 4

Protein length

Min length 425
Max length 426
Mean length (sd) 425.8 (0.4)
Median length 426.0

Protein length distribution