Orthogroup:group_292


Homologs in group_292

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09545 FBDBKF_09545 Morganella morganii S1 hlyD secretion protein HlyD
EHELCC_04345 EHELCC_04345 Morganella morganii S2 hlyD secretion protein HlyD
NLDBIP_04345 NLDBIP_04345 Morganella morganii S4 hlyD secretion protein HlyD
LHKJJB_14285 LHKJJB_14285 Morganella morganii S3 hlyD secretion protein HlyD
HKOGLL_12250 HKOGLL_12250 Morganella morganii S5 hlyD secretion protein HlyD
F4V73_RS00820 F4V73_RS00820 Morganella psychrotolerans hlyD secretion protein HlyD
PMI_RS03045 PMI_RS03045 Proteus mirabilis HI4320 hlyD secretion protein HlyD
PMI_RS06105 PMI_RS06105 Proteus mirabilis HI4320 mdtN multidrug transporter subunit MdtN

Distribution of group_292 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_292 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_292

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_292.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hlyD 7
2 mdtN 1

Product

# Product Occurence
1 secretion protein HlyD 7
2 multidrug transporter subunit MdtN 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1566 8 V Defense mechanisms (V) Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K15549 1 membrane fusion protein, multidrug efflux system - -
K25183 7 membrane fusion protein YbhG - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13437 1 HlyD family secretion protein
PF13533 7 Biotin-lipoyl like
PF16576 7 Barrel-sandwich domain of CusB or HlyD membrane-fusion

Annotations of the 189 SwissProt hits

Annotation Number of occurrences
36 kDa antigen 2
Colistin resistance protein EmrA 1
Fatty acid resistance protein FarA 1
Fusaric acid resistance protein FusE 1
Inner membrane protein YiaV 1
Inner membrane protein YibH 2
Macrolide export protein MacA 4
Membrane fusion protein MtrC 1
Multidrug export protein EmrA 2
Multidrug resistance protein MdtA 44
Multidrug resistance protein MdtE 3
Multidrug resistance protein MdtN 4
Nickel and cobalt resistance protein CnrB 1
Nodulation protein NolF 1
Probable multidrug resistance protein EmrK 1
Putative efflux system component YhbJ 1
Putative multidrug resistance protein MdtA 1
Pyoverdine export membrane fusion protein PvdR 2
UPF0194 membrane protein CKO_02332 1
UPF0194 membrane protein Ent638_1286 1
UPF0194 membrane protein RB0873 1
UPF0194 membrane protein YE2891 1
UPF0194 membrane protein YPA_1093 1
UPF0194 membrane protein YPK_2900 1
UPF0194 membrane protein YPN_2816 1
UPF0194 membrane protein YPTB1212 1
UPF0194 membrane protein YPTS_1292 1
UPF0194 membrane protein YP_0975 1
UPF0194 membrane protein YbhG 42
UPF0194 membrane protein YpsIP31758_2812 1
UPF0194 membrane protein in asrC 5'region (Fragment) 1
Uncharacterized protein HI_0894 1
Uncharacterized protein YdhJ 1
Uncharacterized protein YhiI 1
p-hydroxybenzoic acid efflux pump subunit AaeA 59

Protein length

Min length 328
Max length 346
Mean length (sd) 332.9 (5.5)
Median length 332.0

Protein length distribution