Orthogroup:group_292


Homologs in group_292

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07130 FBDBKF_07130 Morganella morganii S1 pflB formate C-acetyltransferase
EHELCC_03840 EHELCC_03840 Morganella morganii S2 pflB formate C-acetyltransferase
NLDBIP_03840 NLDBIP_03840 Morganella morganii S4 pflB formate C-acetyltransferase
LHKJJB_09670 LHKJJB_09670 Morganella morganii S3 pflB formate C-acetyltransferase
HKOGLL_09305 HKOGLL_09305 Morganella morganii S5 pflB formate C-acetyltransferase
F4V73_RS01315 F4V73_RS01315 Morganella psychrotolerans pflB formate C-acetyltransferase
PMI_RS03470 PMI_RS03470 Proteus mirabilis HI4320 pflB formate C-acetyltransferase
PMI_RS13385 PMI_RS13385 Proteus mirabilis HI4320 cutC choline trimethylamine-lyase

Distribution of group_292 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_292 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_292

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_292.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pflB 7
2 cutC 1

Product

# Product Occurence
1 formate C-acetyltransferase 7
2 choline trimethylamine-lyase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1882 8 C Energy production and conversion (C) Pyruvate-formate lyase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00656 7 formate C-acetyltransferase [EC:2.3.1.54] Pyruvate metabolism
Propanoate metabolism
Butanoate metabolism
Metabolic pathways
Microbial metabolism in diverse environments		 -
K20038 1 choline trimethylamine-lyase [EC:4.3.99.4] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01228 8 Glycine radical
PF02901 8 Pyruvate formate lyase-like

Annotations of the 128 SwissProt hits

Annotation Number of occurrences
(2S)-3-sulfopropanediol dehydratase 1
(2S)-3-sulfopropanediol sulfolyase 1
4-hydroxyphenylacetate decarboxylase glycyl radical subunit 5
Autonomous glycyl radical cofactor 92
Benzylsuccinate synthase alpha subunit 1
Choline trimethylamine-lyase 1
Formate acetyltransferase 16
Formate acetyltransferase (Fragment) 1
Formate acetyltransferase 1 1
Indoleacetate decarboxylase 1
Isethionate sulfite-lyase 4
PFL-like enzyme TdcE 1
Probable dehydratase PflD 1
Probable dehydratase YbiW 1
Trans-4-hydroxy-L-proline dehydratase 1

Protein length

Min length 760
Max length 1142
Mean length (sd) 807.8 (135.1)
Median length 760.0

Protein length distribution