Orthogroup:group_273



Homologs in group_273

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05460 FBDBKF_05460 Morganella morganii S1 alr alanine racemase
EHELCC_12130 EHELCC_12130 Morganella morganii S2 alr alanine racemase
NLDBIP_12470 NLDBIP_12470 Morganella morganii S4 alr alanine racemase
LHKJJB_12330 LHKJJB_12330 Morganella morganii S3 alr alanine racemase
HKOGLL_10945 HKOGLL_10945 Morganella morganii S5 alr alanine racemase
F4V73_RS03835 F4V73_RS03835 Morganella psychrotolerans alr alanine racemase
PMI_RS07310 PMI_RS07310 Proteus mirabilis HI4320 alr alanine racemase
PMI_RS08700 PMI_RS08700 Proteus mirabilis HI4320 alr alanine racemase

Distribution of group_273 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_273 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_273

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_273.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alr 8

Product

# Product Occurence
1 alanine racemase 8

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0787 8 M Cell wall/membrane/envelope biogenesis (M) Alanine racemase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00842 8 Alanine racemase, C-terminal domain
PF01168 8 Alanine racemase, N-terminal domain

Annotations of the 375 SwissProt hits

Annotation Number of occurrences
Alanine racemase 315
Alanine racemase (Fragment) 1
Alanine racemase 1 11
Alanine racemase 2 8
Alanine racemase 3 2
Alanine racemase, biosynthetic 12
Alanine racemase, catabolic 12
Amino-acid racemase 2
Broad specificity amino-acid racemase 8
Lysine racemase 2
Putative alanine racemase 2 1
Serine/alanine racemase 1

Protein length

Min length 356
Max length 407
Mean length (sd) 364.1 (18.0)
Median length 356.0

Protein length distribution