Homologs in group_273

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07925 FBDBKF_07925 91.5 Morganella morganii S1 afuA ABC-type Fe3+ transport system, periplasmic component
EHELCC_13755 EHELCC_13755 91.5 Morganella morganii S2 afuA ABC-type Fe3+ transport system, periplasmic component
NLDBIP_14200 NLDBIP_14200 91.5 Morganella morganii S4 afuA ABC-type Fe3+ transport system, periplasmic component
LHKJJB_08650 LHKJJB_08650 91.5 Morganella morganii S3 afuA ABC-type Fe3+ transport system, periplasmic component
HKOGLL_08200 HKOGLL_08200 91.5 Morganella morganii S5 afuA ABC-type Fe3+ transport system, periplasmic component
F4V73_RS13060 F4V73_RS13060 90.7 Morganella psychrotolerans - ABC transporter substrate-binding protein
PMI_RS15205 PMI_RS15205 35.7 Proteus mirabilis HI4320 - putative 2-aminoethylphosphonate ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_273

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_273

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43951 2.92e-177 498 67 2 344 1 HI_0131 Uncharacterized protein HI_0131 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P21408 1.64e-11 68 25 14 331 1 fbpA Fe(3+)-binding periplasmic protein Serratia marcescens
P0A2C7 5.6e-09 60 28 6 188 3 potD Spermidine/putrescine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2C8 5.6e-09 60 28 6 188 3 potD Spermidine/putrescine-binding periplasmic protein Salmonella typhi
P0AFL0 2.02e-08 58 27 5 180 3 potD Spermidine/putrescine-binding periplasmic protein Shigella flexneri
P0AFK9 2.02e-08 58 27 5 180 1 potD Spermidine/putrescine-binding periplasmic protein Escherichia coli (strain K12)
P0A233 6.84e-08 57 26 4 169 1 pgtC Phosphoglycerate transport regulatory protein PgtC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A234 6.84e-08 57 26 4 169 3 pgtC Phosphoglycerate transport regulatory protein PgtC Salmonella typhi
P44731 1.37e-07 56 26 5 187 3 potD-A Spermidine/putrescine-binding periplasmic protein 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57SD5 1.5e-07 55 24 9 304 3 phnS Putative 2-aminoethylphosphonate-binding periplasmic protein Salmonella choleraesuis (strain SC-B67)
P96062 1.85e-07 55 24 9 304 1 phnS Putative 2-aminoethylphosphonate-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z8W7 2.06e-07 55 24 9 304 3 phnS Putative 2-aminoethylphosphonate-binding periplasmic protein Salmonella typhi
Q5PFQ8 2.06e-07 55 24 9 304 3 phnS Putative 2-aminoethylphosphonate-binding periplasmic protein Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q5N0R0 4.87e-07 54 23 9 273 1 idiA Iron deficiency-induced protein A Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q31L64 4.87e-07 54 23 9 273 1 idiA Iron deficiency-induced protein A Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P45168 8.75e-07 53 25 5 185 3 potD-B Spermidine/putrescine-binding periplasmic protein 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P35755 0.00025 46 23 8 276 1 fbpA Iron-utilization periplasmic protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55454 0.00035 45 24 9 239 3 NGR_a03660 Probable ABC transporter periplasmic-binding protein y4fP Sinorhizobium fredii (strain NBRC 101917 / NGR234)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00915
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 226248 - 227279 (strand: -1)
Length 1032 (nucleotides) / 343 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_273
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF13343 Bacterial extracellular solute-binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1840 Inorganic ion transport and metabolism (P) P ABC-type Fe3+ transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02012 iron(III) transport system substrate-binding protein ABC transporters -

Protein Sequence

MKLKTLSTLVAAGLALSTVSLSTSAAGRLVVYCSATNAMCEAETKAFAEKYDVKTTFVRNGSGSTLAKIEAEKRNPQADVWYGGTMDPHSQAGEMDLLEPYVSANLDQIMPQFRDPAKRKGNYSSAVYVGILGFGVNKDRLKEKGLPIPTCWKDLVKPEYKGEIQIADPQSSGTAYTALATFDQLWGTEQAFDYLKKLNTNISQYTKSGIAPARNAARGEAAIGIGFLHDYSLEVENGAPLELISPCEGTGYEIGGVSIIKNARNMDNAKLFVDWTLSKEAQEISWKEGKSYQILTNTTAESSPMALKLSDLKLINYDMDKYGDSDVRKELINKWVTEVKMGK

Flanking regions ( +/- flanking 50bp)

GTTGGCCCACTTTCATTTTCCGATGACGACACATTTAAAAGGTTCTGAACATGAAACTGAAAACTCTCTCTACACTTGTTGCCGCCGGCTTAGCTCTTTCTACGGTAAGTTTATCCACCAGTGCTGCGGGTCGCTTAGTGGTTTATTGCAGTGCCACAAATGCGATGTGTGAAGCTGAAACTAAAGCTTTTGCTGAAAAGTATGATGTTAAAACCACTTTTGTTCGTAATGGCTCCGGCAGTACATTAGCGAAAATAGAAGCAGAAAAACGCAATCCACAAGCTGATGTTTGGTATGGCGGAACAATGGATCCTCACTCACAAGCGGGTGAAATGGATCTGCTAGAGCCTTATGTATCCGCCAATCTTGATCAGATCATGCCACAATTTCGTGATCCGGCTAAACGCAAAGGAAACTACTCTTCTGCGGTTTATGTCGGTATTCTAGGTTTTGGTGTCAATAAAGATCGTTTAAAAGAGAAAGGTCTACCTATTCCGACCTGTTGGAAAGATTTAGTCAAACCTGAATACAAAGGTGAAATTCAAATCGCTGATCCACAAAGTTCAGGCACTGCATACACTGCATTAGCAACTTTCGATCAATTATGGGGAACAGAGCAAGCCTTTGATTATCTGAAAAAACTAAATACCAATATCTCTCAATATACTAAATCAGGTATTGCACCAGCGCGTAACGCCGCCCGTGGTGAGGCCGCGATTGGTATCGGCTTCTTACACGACTATTCACTCGAAGTTGAAAACGGGGCACCACTAGAGCTTATCTCACCTTGTGAGGGCACAGGTTACGAAATTGGCGGTGTCAGTATCATCAAAAATGCCCGTAATATGGATAACGCTAAGTTATTTGTAGACTGGACACTCTCTAAAGAAGCACAAGAAATTAGTTGGAAAGAGGGTAAATCTTACCAAATTCTCACCAATACCACGGCAGAGTCTTCCCCGATGGCTTTGAAATTATCAGACTTAAAACTGATTAACTACGACATGGATAAATATGGCGATAGTGATGTTCGTAAAGAGCTGATAAATAAATGGGTTACCGAAGTAAAAATGGGTAAATAGCCTATCAATAGGGCGAGAGATGCTCTCGCTCTTTTTTTTACATAATAATA